Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0506 ATGAGAGGAAAAGCAGCATTGCTAGCTCTTATACCAATCCTCACCACAATTTTTGTTCTACTATTTTCAGTAACCAATTTCTCACAACTAGCCACAAAACACCAGACAAAACATCTTCATTTCCAAAACCATCTCCAAGTAGCCAATTCAGCATGCCAAGGAACACTTTATCCAAACCTTTGCGTCTCAACTTTATCCACTTTCCCAGATCTTACCTCCAAAACAATCCCACAGTTGATTTCCTCTATCCTCAACTACACCATAAAAGAAGTTAAACAGTCCTCTTCCAATGTCACCGGTCTTCGAGTCCGAGCCAGAAGTCTCAAAAAAACACTCGAACAAAGAGCTCTTGAAGATTGCGTGAATCTCTTCGACACCACTATTGAAGAGCTCAAAACAACCATTTCCGATCTCTCTCAAGCTCCAACCACAATAGCTTCCCACAATAAACGCGACTGTCAAACTCTACTCAGCGGCGCAATGACGAATATGTACACATGTTTGGACGGTTTTGCTTATAGTAAAAGTAACCTGAGACACAAAATTGAGAATAGGCTGTATGATATTTCCAAACACGTTAGTAATTCACTTGCCATGTTGAAGAAAGTCCCTGGAGTGAAATCCAAAACTTCCAACTCCGAGGCTTTCCCGGAATACGGCGAGGTGAAAGACGGGTTTCCGTCGTGGCTGACCACGAAAGATCGGAAGCTACTACAAGTTGCAGTGAATCAAACCAAATTCAATCTTGTGGTTGCTAAAGATGGAACAGGAAATTTTACTACTATAGGAGAAGCATTATCTGCAGCTCCAAATTCCAGTGCAACTAGGTTTGTGATATACATAAAAACTGGGGCTTATTTTGAGAATGTGGAAGTGATAAGGAAAAAGAGTAATTTGATGTTAGTTGGAGATGGAATTGGGAAGACAGTTGTGAAGGCAAGTAGAAATGTGGTTGATGGGTGGACCACTTTTCAATCAGCTACTTTTGCTGTTGTGGGAGACAGATTCATAGCAAAGGGTATAACCTTTGAGAACTCAGCTGGAGCTAGCAAACACCAAGCCGTAGCCTTGAGAAGCGGTGCCGATTTCTCAGCCTTCTACCAATGCAGCTTTGTTGCTTACCAAGACACTCTCTATGTCCACTCCCTCCGTCAATTCTACCGCGAATGCGATGTTTATGGCACGGTAGACTTCATCTTTGGCAACGCAGCGGTAGTTTTCCAAAACTGCAACCTATACGCGCGCAAACCCGATCCAAACCAAAAGAACCTATTCACTGCACAGGGCAGAGAAGATCCTAACCAAAACACAGGAATTTCAATCCTGAACTCTAAGGTTGCGGCCGCAGCGGATTTGATTCCGGTAAAATCAACGTTTAAGAGTTACCTCGGCCGGCCTTGGAAAAAATATTCAAGGACAGTTTATCTTAATACTATTATAGAGGATTTGATAGATCCGGCCGGGTGGTTAGAGTGGAACGGAACATTTGCGTTGGACACGTTGTACTATGGCGAGTATAAGAATCGGGGTCCGGGTTCGAACACGAGTGCCAGGGTTAATTGGCCAGGTTATAAAGTTATTACTAATGCAACTGAGGCAAGTCAGTTCACTGTTAGGCAATTTATTCAAGGCACTGAGTGGTTGAACTCTACTGGTGTTCCATTTTTTCTTGATTTGAGTTGA 1683 0.4296 MRGKAALLALIPILTTIFVLLFSVTNFSQLATKHQTKHLHFQNHLQVANSACQGTLYPNLCVSTLSTFPDLTSKTIPQLISSILNYTIKEVKQSSSNVTGLRVRARSLKKTLEQRALEDCVNLFDTTIEELKTTISDLSQAPTTIASHNKRDCQTLLSGAMTNMYTCLDGFAYSKSNLRHKIENRLYDISKHVSNSLAMLKKVPGVKSKTSNSEAFPEYGEVKDGFPSWLTTKDRKLLQVAVNQTKFNLVVAKDGTGNFTTIGEALSAAPNSSATRFVIYIKTGAYFENVEVIRKKSNLMLVGDGIGKTVVKASRNVVDGWTTFQSATFAVVGDRFIAKGITFENSAGASKHQAVALRSGADFSAFYQCSFVAYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYARKPDPNQKNLFTAQGREDPNQNTGISILNSKVAAAADLIPVKSTFKSYLGRPWKKYSRTVYLNTIIEDLIDPAGWLEWNGTFALDTLYYGEYKNRGPGSNTSARVNWPGYKVITNATEASQFTVRQFIQGTEWLNSTGVPFFLDLS* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0506 560 Pfam Pectinesterase 248 544 IPR000070 GO:0030599|GO:0042545
Psa3g0506 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 205 IPR035513 -
Psa3g0506 560 SUPERFAMILY Pectin lyase-like 245 557 IPR011050 -
Psa3g0506 560 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Psa3g0506 560 SMART PMEI_2 43 199 IPR006501 GO:0004857
Psa3g0506 560 CDD PMEI-like_3 50 205 - -
Psa3g0506 560 Pfam Plant invertase/pectin methylesterase inhibitor 49 199 IPR006501 GO:0004857
Psa3g0506 560 Gene3D - 242 559 IPR012334 -
Psa3g0506 560 TIGRFAM PME_inhib: pectinesterase inhibitor domain 18 202 IPR006501 GO:0004857
Psa3g0506 560 PANTHER PECTINESTERASE 17 558 - -
Psa3g0506 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 203 IPR035513 -
Psa3g0506 560 PANTHER PECTINESTERASE 17 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0506 Psa-Chr3 47969747 47982018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0506 72 559 Carbohydrate Esterase AT4G02320 55.865 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0506 K01051 - gmx:100813592 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0506 3 47969747 47982018 Psa3g0506 3 47969747 47982018 ECH