Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0497 ATGGAATCAGAAGCATCCGTGTCATTTTCAGCTGCATCTCTCGTGGAAGACGTACTTCAACAACACGGTCATGGCCTCAAAGATCTTGATTTAGAATTCAGGAAAGCAGAAGAAGCTGCATCTAGAAGATATGAAGCGGCAGGGTGGTTGAGAAAAATAATTGGAGTTGTTGCTGCTAAAGATTTACCAGCAGAGCCATCCGAAGAGGAGTTTAGGCTTGTTTTGAGAAGTGGAATTATCTTATGCAATGCTATTAATAAAGTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCTATTGATTCTGCACTGATCCCCAATGGAGCACCATTATCCGCGTATCAATATTTTGAAAATGTGAGAAATTTTATGGTGGCCATACAAGAAATTGGAGTTCCTACCTTTGAGCCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAATTGCGTTTTGGCTCTTAAGTCCTACTGTGAATGGAAACAAAATGGCGCAAATGGTGCGTGGAAATTTGGTGGAAATCCCAAACCTACTATTTCTGCTAAATCTTTTGTGAGAAAAAACTCGGACCCATTCACTAATTCCTTGTCAAGGACCTCTTCAATCAATGAAAAAACTCTGGCTACTCTTAATTCTGACATTGAGTCTAGTAAAATGTCTGGTTCCCTTTCTTTGAGTACGCTTGTTCGTTCTATTCTGTCTGATAAAAAGCCCGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAACAAGGTAGTTGAGGAGTTTGAACACCGTATTGCAAGCCAAGGTGAACAGACAAAAATTACTTTAAGAGATCATGTTTCTCAAAAAAATGGATCTGCCTCAATGTTTGTCGTGGCAGATAAAAAGGTGGAGAACAAGATTCATATGGTAGCTAAGAAACAGGATTGCATTTATAAAAATCGTATGGATGCTGAGGAATTGCAAAGCCAACACCTTAAACAGAAAGTGCTTTTTGACCAACAACAAAAAGACATTCAAGAGCTAAAGCTTACTCTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCGTGACGAATGTTCCAATCTTGGAATGCATATTCATGGCTTAGCTCAGGCTGCTTCTGGATATCATAGAGTTCTGGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAAGGAAGTATTAGGGTATATTGTCGAATAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAGTAGAAAATATAGAAGACGGAACGATCACAGTTAGTATTCCTTCGAGGAGTGGGAAGGGGCAAAGATCCTTCAATTTTAACAAAGTCTTTGGACCATCTGTCACCCAAGCGGAGGTATTCCTGGATATGCAACCACTTATTAGATCTGTTCTTGATGGTTATAATGTCTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACAATGACCGGACCAAAAGAGATCACTGAGAAGAGCCAAGGTGTAAATTACAGGGCTCTAAGCGATTTGTTTTTTATAGCCGAGCAAAGAAAGGACACTTTCCACTATGATGTTTGTGTTCAAATGATTGAAATTTATAATGAGCAAGTCAGGGATCTATTGGTCACCGATGGAACAAACAAAAAATTAGAAATTCATAGCAGCTCTCACAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTCCCAGTTTCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCACAAGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGTAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGGCATCCGGAGCTTCCCTCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTAGATAAATCAGAGGCCACTGGAGATAGGCTAAAAGAGGCACAACATATTAACAAATCTTTATCAGCTTTGGGCGATGTCATAGCTTCTCTGGCTCATAAAAACGCACACATACCTTATAGAAACAGTAAACTCACACAATTGCTCCAAGATTCACTTGGAGGACAGGCCAAGACCCTGATGTTTGTTCACATAAGTCCAGAAAGTGATGCAATTGGAGAGACAATTAGCACTTTAAAATTTGCAGAAAGAGTTGCGACAGTTGAACTTGGTGCTGCTCAAGTAAACAAAGATGGTGCAAATATTAAAGAGCTCAAAGAACAGATTGCTAGCCTTAAAGCAGCACTGGCAAGAAAAGAAGGGGAATCAGAACATTCTTTTTCTGGAAGCTCTGAAAAATATAGGACAAAGGCTGAGCTATCACCTTATCATTTAAGCCAGAGGGTTGTAGACTCAGGCGACCGGCTTGGATACAGGCGACCAATGGTTGAAGTTGGCAACATAGAGCTTCAGAGTAAAACCATATTGGGACAGAAAACTAAAAGCGTTGATTTTGATGAGATATCAGTAAACTCACCACCCTGGCCCCCAGTAAATAGTTTTGGACAAAATGAAGTTGAGGATGAGAAAGAAACGGGTTCCGGAGAATGGGTTGATAAGGTAATGGTAAACAAGCTAGAAGCAAACAAAACAGACAACAATCTCTTGGGTTGTTGGCAAGAAAGCAATGGAAACTTATCTGAAGCCTTTTATCAAACGTATCTCCAAGATTCTTCCAAAACGTATTCAGAACCGTCAGAAGAGTCCTATAATATGTTCACGGGAGGTCACCAGTTTAATAGCATTATGGCTTCAGATGATAACATGGATGAGATTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTGCTTTGGCAATTCAATCATTCTAAACTTACCGGTTTGACCAATGGAATTGGATCAAAGACTATTATGAAATCCGTCTCAAAGCCAACAAAAAGCCCACAATTAAGCAAGCGTTCTAGTCATTCTTCTCTTGGTGGTCCTTCACCTTCATTGAAACAATCAAAAGTTGTCTCACATAAGACAGGAAGGAGTCCAGCTCCTGTTGACATGAAACGTAAAATTGGGGGTAGAAAGTAA 3054 0.4044 MESEASVSFSAASLVEDVLQQHGHGLKDLDLEFRKAEEAASRRYEAAGWLRKIIGVVAAKDLPAEPSEEEFRLVLRSGIILCNAINKVQSGAVPKVVESPIDSALIPNGAPLSAYQYFENVRNFMVAIQEIGVPTFEPSDLEQGGKSSRIVNCVLALKSYCEWKQNGANGAWKFGGNPKPTISAKSFVRKNSDPFTNSLSRTSSINEKTLATLNSDIESSKMSGSLSLSTLVRSILSDKKPEEIPMLVESVLNKVVEEFEHRIASQGEQTKITLRDHVSQKNGSASMFVVADKKVENKIHMVAKKQDCIYKNRMDAEELQSQHLKQKVLFDQQQKDIQELKLTLHTTKAGMQFMQMKFRDECSNLGMHIHGLAQAASGYHRVLEENRKLYNEVQDLKGSIRVYCRIRPFFPGQPNQLSAVENIEDGTITVSIPSRSGKGQRSFNFNKVFGPSVTQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFFIAEQRKDTFHYDVCVQMIEIYNEQVRDLLVTDGTNKKLEIHSSSHKGLSVPDASLVPVSSTIDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLASGASLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAHKNAHIPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAAQVNKDGANIKELKEQIASLKAALARKEGESEHSFSGSSEKYRTKAELSPYHLSQRVVDSGDRLGYRRPMVEVGNIELQSKTILGQKTKSVDFDEISVNSPPWPPVNSFGQNEVEDEKETGSGEWVDKVMVNKLEANKTDNNLLGCWQESNGNLSEAFYQTYLQDSSKTYSEPSEESYNMFTGGHQFNSIMASDDNMDEIDAATSDSSEPDLLWQFNHSKLTGLTNGIGSKTIMKSVSKPTKSPQLSKRSSHSSLGGPSPSLKQSKVVSHKTGRSPAPVDMKRKIGGRK* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0497 1017 Gene3D Kinesin motor domain 394 765 IPR036961 -
Psa3g0497 1017 ProSiteProfiles Kinesin motor domain profile. 399 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g0497 1017 MobiDBLite consensus disorder prediction 963 1017 - -
Psa3g0497 1017 Coils Coil 731 758 - -
Psa3g0497 1017 SMART ch_5 42 160 IPR001715 GO:0005515
Psa3g0497 1017 MobiDBLite consensus disorder prediction 963 999 - -
Psa3g0497 1017 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1014 - -
Psa3g0497 1017 Gene3D - 28 177 IPR036872 -
Psa3g0497 1017 SMART kinesin_4 397 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g0497 1017 CDD KISc_C_terminal 397 726 - -
Psa3g0497 1017 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Psa3g0497 1017 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g0497 1017 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g0497 1017 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g0497 1017 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g0497 1017 Pfam Kinesin motor domain 405 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa3g0497 1017 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1014 - -
Psa3g0497 1017 Pfam Calponin homology (CH) domain 42 162 IPR001715 GO:0005515
Psa3g0497 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 756 IPR027417 -
Psa3g0497 1017 SUPERFAMILY Calponin-homology domain, CH-domain 42 172 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0497 Psa-Chr3 47145360 47151800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0497 387 724 Calmodulin-binding Proteins AT5G65930 42.773 2.16e-76 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0497 K10406 - gmx:100795476 1558.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0497 3 47145360 47151800 Psa3g0497 3 47145360 47151800 ECH
Psa3g0497 3 47145360 47151800 Psa6g3754 6 326710313 326717390 ECH
Psa3g0497 3 47145360 47151800 Psa6g3754 6 326710313 326717390 PCT