Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0461 ATGGCAAAGTCTAATACAAGTCTTCTTCATCTTCTTTTATTGTTATTATCAAATATTTCATTCCAAGTTGCTACATGTGGTTCCATAGTAAAGTTTCTTCCTGGATTCAATGGACCTCTTCCTTTTGTTCTTGAAACTGGATATGTGGGAGTGGGAGAAAAAGAGGATGTGCAAGTGTTTTACTATTTCATTGAATCAGAGAACAATCCAAAGGAAGATCCTCTCATGCTTTGGCTCACTGGTGGACCTGGCTGCTCTGCTTTGTCTGGCCTTGTCTTTGAAATTGGTCCACTTGAATTTAGAAAAGAGGAATACAATGGGAGTTTGCCTAATCTGATCTTGAAGCCACATTCATGGACAAAGGTGAGTAGCATTATATTCGTAGATTTGCCCGTATACACAGGTTTCACATATGCAACAACAAATTCTGGGTCAGATCGAAGTGACTCGTTACTAGTTGATCAAGCTCATCAATTTCTCAAAAAGTGGTTGGTTGATCATCAAAAATTTCAATCAAATGAAATTTATATTGGTGGTGATTCATACTCTGGCATTCCTCTTCCAGTAATTGTCCATAAAATTGTAGAAGAAAATGAACAAGGTGTCCAACCTTGGATTAATCTCCAGGGATACTTGTTGGGGAATGCTGTAACAACCGAAAAGGAAAAAAACTATGCAATCCCTTTCGCCCATGGAATGGGACTCATATCTGATGAACTATACAATTCACTCCAAATAAATTGCAATGGAGAGTATATAAATGTAGAGACCACAAATGTTTTATGTTCTAGAGATATCAAATCATATGACAAATGTACATCAGGACTTAATAAAGCTCACATTTTAGACCCATTATGTGAGTGGCGTGATGATACTGAATTTTTTTTGAGAAGATCTCTGATTAAGAAATATCCCTCCAATTTCCTCAGTACAAATCTCAGATTGCCTCCCTTATATTGTAGAAGTTATCCATATTTTCTTTGCGGTTTTTGGGCCAATGATGATAATGTTCGCAAAGCATTGCACATACGTAAGGGTAGTATTCAAAAATGGCATCGGTGTTCCTATAATATACCTCATAAGAGAGATATCTTTAACAGTTATGATTATCATGTAAATCTCAGTAGAAAAGGCATTCGTTCACTGATTTACAGCGGTGATCATGACATGTCAGTTCCATTCTTAGCAACACAAGCATGGATTAGATCTTTAAACTATTCCATTGTTGATGATTGGAGACAGTGGCATACCGATGATCAAGTTGCAGGATACACAAGGACTTACTCTAATCAAATGACATTTGCAACTGTGAAGGGTGGCGGACACACAGCTCCGGAGTTCCGACCTAAAGAATGTTTTGACATGTTTAGTAGGTGGATATCAAAGAGGGATTTATAG 1398 0.3727 MAKSNTSLLHLLLLLLSNISFQVATCGSIVKFLPGFNGPLPFVLETGYVGVGEKEDVQVFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLEFRKEEYNGSLPNLILKPHSWTKVSSIIFVDLPVYTGFTYATTNSGSDRSDSLLVDQAHQFLKKWLVDHQKFQSNEIYIGGDSYSGIPLPVIVHKIVEENEQGVQPWINLQGYLLGNAVTTEKEKNYAIPFAHGMGLISDELYNSLQINCNGEYINVETTNVLCSRDIKSYDKCTSGLNKAHILDPLCEWRDDTEFFLRRSLIKKYPSNFLSTNLRLPPLYCRSYPYFLCGFWANDDNVRKALHIRKGSIQKWHRCSYNIPHKRDIFNSYDYHVNLSRKGIRSLIYSGDHDMSVPFLATQAWIRSLNYSIVDDWRQWHTDDQVAGYTRTYSNQMTFATVKGGGHTAPEFRPKECFDMFSRWISKRDL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0461 465 Pfam Serine carboxypeptidase 34 461 IPR001563 GO:0004185|GO:0006508
Psa3g0461 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 464 IPR001563 GO:0004185|GO:0006508
Psa3g0461 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Psa3g0461 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Psa3g0461 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Psa3g0461 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Psa3g0461 465 Gene3D alpha/beta hydrolase 39 465 IPR029058 -
Psa3g0461 465 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 9 464 - -
Psa3g0461 465 SUPERFAMILY alpha/beta-Hydrolases 30 464 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0461 Psa-Chr3 44048026 44056521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0461 24 53 Calmodulin-binding Proteins AT2G22960 73.333 1.73e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0461 K16296 - gmx:100792006 759.985