Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0451 ATGATGGAGAAAAAGAGTATGAATATGGATGATTATTCTATTGGATCTTTTCCTACTTATTCACTTACAAACATGTTTGATTTATCTGAAGAAAGGAGTTTCATGGAGCTACTAGGTGTGCAGAACATGAACAATAGTTACAGTTTGCTTGATTCACCTTTGGATGTAAAGGAATCACTCGCTGAGAATAATGGAAATGGAAAAGAAACGTCTTTGAACAGTCAACAACAACCTGCTACTCCTAACTCTTCTTCCATTTCATCTGCGTCTAGTGAAGCACTCAACGATGAACACAATAAAACTGTTGACCAAGCCAATAACCATCTCCAAAAACAGTTGAAAGCTAAGAAGACAACAAATCAGAAGAGACAGAGAGAAGCTAGAATCGCGTTCATGACGAAAAGTGAGGTGGATCATTTAGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAACAGCCCTTTTCCGAGGAGCTATTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACACGTGGAGAGGTCATTGAATGATCCAACCATTGTAGTAACAACCTACGAAGGGAAACACACGCATCCAAATCCAGTTATGGGTCGTTCTTCGGTTTCTCATGTTGGGTCGCTAATACCACCACCGGCAGCGGAATGCACCACCACCAACTTTGGTGGTTCTGAAAACTACTTGATGTCGTCTCCATATTATAATCACCACCGTCAACAGGTTCTCTTCAATACGTTGTCGTCTATGGGTTTTCCCTCAAAGATTCCTCAAGAGAGATTGGTTTGTAGTAATCCAAGGGTTATGGATCATGGTCTTCTTCAAGATGTTGTTCCTTCAAATATGTTTAAGGAAGAGGAGTAG 876 0.403 MMEKKSMNMDDYSIGSFPTYSLTNMFDLSEERSFMELLGVQNMNNSYSLLDSPLDVKESLAENNGNGKETSLNSQQQPATPNSSSISSASSEALNDEHNKTVDQANNHLQKQLKAKKTTNQKRQREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKHVERSLNDPTIVVTTYEGKHTHPNPVMGRSSVSHVGSLIPPPAAECTTTNFGGSENYLMSSPYYNHHRQQVLFNTLSSMGFPSKIPQERLVCSNPRVMDHGLLQDVVPSNMFKEEE* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0451 291 Coils Coil 95 126 - -
Psa3g0451 291 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g0451 291 MobiDBLite consensus disorder prediction 64 95 - -
Psa3g0451 291 MobiDBLite consensus disorder prediction 64 97 - -
Psa3g0451 291 PIRSF WRKY_txn_fact_IIc 1 291 IPR017396 GO:0003700
Psa3g0451 291 PANTHER WRKY TRANSCRIPTION FACTOR 15 259 - -
Psa3g0451 291 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 259 IPR044810 GO:0003700
Psa3g0451 291 SUPERFAMILY WRKY DNA-binding domain 132 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g0451 291 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g0451 291 Pfam WRKY DNA -binding domain 141 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g0451 291 Gene3D WRKY domain 124 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0451 Psa-Chr3 42563335 42565900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0451 78 290 WRKY Transcription Factor Family AT2G47260 51.807 4.12e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g0451 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0451 - - cam:101495104 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0451 3 42563335 42565900 Psa3g0451 3 42563335 42565900 ECH
Psa3g0451 3 42563335 42565900 Psa6g3692 6 322606521 322609357 PCT