Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0448 ATGGGTACACTTTTGATTTCAAAGATAATGGACGAATACCCTAATAGGATGAAGCTTACCTTCTCCTTTTTCCCTTCTCCTAAGATCTATGACACGGTGGTGGAACCCTACAACGTTACTCTCTCTGTTCAAGCACTCATGGAGACCTTCAAATCGATAGAGCCTCATTACATACGATGCGTGAAGCCAAATTCATTGGACCAACCACGAATGTTTGAGAATGCAAGCATCATACATCAATTATTTTATGAACTTGCTTATTTGTTTTAA 270 0.3889 MGTLLISKIMDEYPNRMKLTFSFFPSPKIYDTVVEPYNVTLSVQALMETFKSIEPHYIRCVKPNSLDQPRMFENASIIHQLFYELAYLF* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0448 89 Pfam Myosin head (motor domain) 42 83 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa3g0448 89 Gene3D Tubulin/FtsZ, GTPase domain 1 87 IPR036525 -
Psa3g0448 89 PRINTS Tubulin signature 5 26 IPR000217 GO:0005874|GO:0007017
Psa3g0448 89 PRINTS Tubulin signature 30 43 IPR000217 GO:0005874|GO:0007017
Psa3g0448 89 PANTHER TUBULIN 1 49 IPR000217 GO:0005874|GO:0007017
Psa3g0448 89 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 83 IPR027417 -
Psa3g0448 89 PANTHER TUBULIN BETA CHAIN 1 49 - -
Psa3g0448 89 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 56 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0448 Psa-Chr3 42317433 42319694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0448 41 81 Myosins gene family AT3G58160 65.854 7.46e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0448 K07375 - smo:SELMODRAFT_13250 77.7962