Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0442 ATGGAGGAAACTTTTGTGCCTCTTGAAGGTATTAAGAATGATCTAAGAGGAAGGTTAATGTGCTACAAACAAGATTGGACAAGTGGAATCAAAGCAGGTGTAAGGATTTTGGCTCCTACAACATACATATTTTTTGCTTCTGCAATACCTGTAATTTCATTTGGCGAACAGCTTGAAAGAAACACTGAGGGTGTTTTAACAGCTGTTCAAACGTTGGTGTCAACTTCAATATGTGGCATTATACACTCAATCATTGGTGGTCAACCTTTGCTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTACACATTCATGTTCAATTTTGCTAAAGAAAGACCTGAGTTGGGTAGGAATCTGTTTCTTGGATGGACTGGATGGGTATGTGTATGGACTGCATTGATACTGTTCTTGCTGGCCATCTTAGGAGCATGTTCCATCATCAACAGGTTTACCCGAATTGCTGGCGAGTTGTTTGGCATGCTTATTGCGATGCTTTTCATGCAGCAAGCTATCAAAGGACTCGTGGATGAGTTCCGCATACCAAAGAGAGAAGATACGAAATCGGTTGAGTTTTTACCGTCGTGGAGGTTTGCTAATGGGATGTTTGCTTTGGTCCTTTCATTTGGCCTTCTCCTCACCGCATTAAAAAGCAGAAAAGCGAGATCATGGCGCTATGGCAGTGGTTGGCTTCGTAGTCTTATAGCCGACTACGGTGTGCCGCTTATGGTCCTAGTTTGGACAGGTGTGTCCTACATGCCAACTGCAAGTGTTCCGAACGGTATCCCGAGACGCCTCTTTAGTCCGAACCCATGGTCGCCCGGTGCCTATGACAATTGGACGGTTGTTAAGGATATGGTTCAAGTTCCTGTTGTTTTCATAATCGGAGCATTTATACCAGCAACTATGATCGCCGTGCTTTATTACTTCGATCATAGTGTCGCATCTCAGCTTTCTCAGCAGAAAGAGTTCAATTTGCGAAAACCATCTTCTTACCATTATGATTTACTTCTTTTGGGATTTTTGACGTTATTGTGTGGCCTTATTGGAATTCCTCCCGCAAATGGAGTCATACCGCAGTCTCCGATGCATACGAAAAGCCTCGCAACTCTTAAACATCAGTTGCTTCGTAACAAACTCGTGATAACTGCTCGAAAAAGCATCGGTAAGAATGCTAGTTTAGGACAGTTATATGGTAACATGCAAGAAGTATACCATCAAATGCAGACACCTCTTATTTACCAGGACCCTTCCGCTCGAGTTCAAGGACTAAAAGAACTAAAAGAAACAACCATTCAAGCAGCTACTAGTATGGGAAGCGTGGACGCTCCGGTCGACGAGTCTATATTTGACGTCGAGAAAGAAATAGACGACCTGCTACCTGTTGAGGTAAAAGAACAACGTGTCAGTAACTTGCTTCAATCGGTAATGGTTGGAGGATGTGTTGCAGCCATGCCAATTCTCAAGAAAATCCCAACTTCAGTACTTTGGGGTTACTTCGCTTTCATGGCAATCGAAAGTTTACCTGGAAACCAGTTTTGGGAAAGGATCTTGTTACTATTCACCGCACCGAGCCGAAGATTCAAGGTTCTTGAAGATTACCATGCTACTTTTGTTGAAACAGTTCCTTTCAAGACAATAGCAACATTCACAATTTTCCAAACCATTTATCTACTGATATGTTTTGGACTAACTTGGGTACCTATTGCCGGAGTCATGTTTCCGTTGATGATCATGCTCTTAGTTCCGGTTCGACAATACTTTCTTCCCAAGTTTTTTAAAGGTGCACATCTTCAAGACTTGGATGCAGCTGAGTACGAAGAGCAAACCGCTTTACCCTTCAACCTTGCATCGCAATCGGAGTTTGGAGCTGGTGTTTCTCATATTGGAGATGGTGAGATATTCGATGAAGTTATCACTAGAAGCCGTGGCGAGTTTAGGCATACTATCAACAGTCCAAAGATTAATAGCTCAACTCCAACACCAAGAAATGATCCTAAGAGCCGTCTTAGCCCGCGCCTCTCTTTTAATTCTCGTGTGGGGGAGCTCACGACGGAGCAAAGTCCTCGGTCGGGTGCAAGAGGACCTAATAGTCCGATAATGCCTAGAGAAATGAGATTGTCGAATAGGGGAATAAGTCCTCTCAAACCTGACTCAAAACAGCAAGACAAAAAATAA 2178 0.432 MEETFVPLEGIKNDLRGRLMCYKQDWTSGIKAGVRILAPTTYIFFASAIPVISFGEQLERNTEGVLTAVQTLVSTSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLGWTGWVCVWTALILFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPKREDTKSVEFLPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYMPTASVPNGIPRRLFSPNPWSPGAYDNWTVVKDMVQVPVVFIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVITARKSIGKNASLGQLYGNMQEVYHQMQTPLIYQDPSARVQGLKELKETTIQAATSMGSVDAPVDESIFDVEKEIDDLLPVEVKEQRVSNLLQSVMVGGCVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDYHATFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPVRQYFLPKFFKGAHLQDLDAAEYEEQTALPFNLASQSEFGAGVSHIGDGEIFDEVITRSRGEFRHTINSPKINSSTPTPRNDPKSRLSPRLSFNSRVGELTTEQSPRSGARGPNSPIMPREMRLSNRGISPLKPDSKQQDKK* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0442 725 Gene3D Helical hairpin bin 18 60 - -
Psa3g0442 725 MobiDBLite consensus disorder prediction 649 725 - -
Psa3g0442 725 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Psa3g0442 725 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016021
Psa3g0442 725 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Psa3g0442 725 PANTHER BORON TRANSPORTER 2-RELATED 1 703 - -
Psa3g0442 725 MobiDBLite consensus disorder prediction 649 694 - -
Psa3g0442 725 PANTHER ANION EXCHANGE PROTEIN 1 703 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0442 Psa-Chr3 42081831 42086175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0442 1 697 Antiporters AT3G62270 82.546 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0442 K24194 - gmx:100776705 1293.49