Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0412 ATGGAAATTGAATTAGTTTCTAGAGAAATTATCAAACCTTCATCCCCAACTCCTTCCCACCTTAGAATATATCCACTTTCTTTCATAGACAACATGTTTGTGTGTAATGTTCCACTACTCTTCTTTTACAACCCAAATGAGAGTAGTGACCAAGATTCAAAAATATCACAACTCAAAAAATCATTATCTCATCTTCTATCCAAATACTATATTTTTTCTGGCAGGCTAAAAGATAAAATTACTATTGAATGTAACGATCAAGGTGTTCCATTTCTTGTGACAAAGATAAAAAGCAAACTATCACATCTCCTTGAACACCCAGAAGAAAACTTTTTGAACCATTTGTTCGCTGATGGATTGCAATGGAAAGACGGAGATCCGAGTTCAGCTTTCATAGCCATTCAAATCAATTGTTTTGAATGTGGAGGAATCGCTATAAGTATCTGCATGAATCACAAATGTGGGGATGCTTCCACATTTATCACTTTCATGAGGGAATGGGCCATTATAAATAAAAAATTAGAAGAAGAAAAAGGAGAAGAGTCGGTAATATTACCCTTTCCTTTACATGAGGGAGGATCTTCAATTTTTCCACAAAAAAACTTACCTATTTTACCAGAATCTGTACACAATAGACAGAAGAATGTGGCGTGTAAAAGGTTTGTATTTCAACCATCTATAATTAAGTTTCTTAAGGAATTGGCAACTTCTAGTTCTGTACTTTTTCCCTCACGGGTGCTAGTTGTAAAAGCTTGGATTTATAAGCATGCAGTTTCATCAATCGGATTAGATTTCAAGACATTACCGTTTCTCATGGCTGTAGACCTTCGCAAAAGAATGGTTCCTCCTTTATCTGAAAATTGTGTGGGAAATATAATTTGGTTTTCATCTATGTTTGCTGATAAGGAGGAAATGGAGTTGAAAGATTTGGTATGCAAAATAAAACAAGGATTGTCAGAATTTTGTGACACTTATCCAAAATTATTTGGAGGGAATAATTTTTCGTTGTTATCTGAGTTTATGAATAAAGCTATTGATCTTAAATCTAAGACAAGAGATGTGATTGGTTTTAGTAGTTGGTGTAATTTTCCAATATATGAAGTGGATTTTGGATGGGGAAAACCAACATGGGTTACTACTTGTGGTAGTCCTTGGAAGAATTTCATAATTCTGATGGATAGAAAAGATGGGAAGGGGATTGATGCGATTGTGAGCTTGGAAGAGAATCACATGACTAAATTTGAGCATGAATATTTGGAGCTTCTTTGA 1269 0.3452 MEIELVSREIIKPSSPTPSHLRIYPLSFIDNMFVCNVPLLFFYNPNESSDQDSKISQLKKSLSHLLSKYYIFSGRLKDKITIECNDQGVPFLVTKIKSKLSHLLEHPEENFLNHLFADGLQWKDGDPSSAFIAIQINCFECGGIAISICMNHKCGDASTFITFMREWAIINKKLEEEKGEESVILPFPLHEGGSSIFPQKNLPILPESVHNRQKNVACKRFVFQPSIIKFLKELATSSSVLFPSRVLVVKAWIYKHAVSSIGLDFKTLPFLMAVDLRKRMVPPLSENCVGNIIWFSSMFADKEEMELKDLVCKIKQGLSEFCDTYPKLFGGNNFSLLSEFMNKAIDLKSKTRDVIGFSSWCNFPIYEVDFGWGKPTWVTTCGSPWKNFIILMDRKDGKGIDAIVSLEENHMTKFEHEYLELL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0412 422 PANTHER F21J9.9 5 418 - -
Psa3g0412 422 Gene3D - 1 203 IPR023213 -
Psa3g0412 422 Pfam Transferase family 1 418 - -
Psa3g0412 422 Gene3D - 213 422 IPR023213 -
Psa3g0412 422 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0412 Psa-Chr3 39450444 39452138 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0412 1 421 Monolignol Biosynthesis Gene Families AT5G48930 22.944 2.78e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0412 - - gmx:100806928 399.823