Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0411 ATGGATGACTGTTGTGCTGTTTGCGCTGAGCCGTTGGAATGGGTTGCGTACGGACCTTGTTTGCACCGTGAGGTTTGCTCCACCTGTGTCGCGAGACTCCGTTTCATTTGTGACGATCGCCGTTGTTGCATCTGTAAGACCGATTGCAATCTCATTTTTGTTACCAAGGCTCTAGGAGATTATACAAGGGTGGTTAATGATTTTGCATCCCTTCCGTCTGAGGTAAGGGAAGGAAAGGTTGGGTCGTACTGGTACCATGAGGATATGAATGCATTTTTCGACGATGTGGACCATTACAAGATGATCAAGGCTATGTGTAGGCTTTCCTGCAGTGAATGTGACAAGGGGGAGGAGCAACAGAATGATGGGTCAAGGCGACAAGCAAGGTTTAGGAATATAGGACAGCTGAAGGGTCACTTGTTCCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGAAGAAAGGTATTTATCTGTGAGCAAAAACTATATACTAGAGCCCAGTTAAATCAACATATAAACACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTTTGTAAAACCCCATTTTATGGGGACAATGAACTGTACACACACATGTCTACGGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGACAGTATGAATACTATAAGAATTATGATGACCTAGAGATCCACTTCCGACAACAGCATTTCTTATGTGAAGATGATGCTTGCCTTGCCAAGAAATTTGTTGTTTTTCAATCTGAATCAGAGATGAAGAGACATAATACTATGGAACATGGAGGACGCATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCGACTAGTTTTCGATATAAACACAATAATGAACAGGATCAACGTCGTGGAAGAGGGCGAATGTTTCGTCGCGATCTTTCTGAAAATCAACTTTCCATGGCCATTGAAGCCAGTTTGGAGACTGCTAATGCTGAGCAAACATATCGTGAGCCAACTTCAAGTAGTGGGCAGATTGCTTACGAAGACGGGGATGCAGATATTGATTCCATCGTTCATCCGTTTGAATCATTAGCTACTGCAGGTTCTGAATCAACATCAAGATACCGTCAGGCCTTAGGGCATGGCTCTAAACCACTGGTAGACTCCTCCTTTCCTCCCCTTCCCATAACTTCCAGCAATGGCCAGCAAAGGTCCAAACATGAGTTTGAAGGTTCATCAAGCAATACTATGGCAGCACGTTTGCGTCGGCATGGCAACAGAAATATATCTGTTATTAACTCTGGAAATGCCTGGTCTGTAGCAGGTCGTGGACCTGGACAAACATCAAGTAGTCATTCACATTCTAAAAAGTCAACAAATCATGCCCTTGGAGGGTCTCATAACTCTAGTCAGACAAAGACAGTAGTTAGCGGTGGACCCCCACCATCAAGTTATGCTAATCCTATTCCATCTGCACATAGAACTGCTCATGGGCAATTACCTGCTGGTCCATCGTGGGACACACGTGACAATGGTAGAATCGTTCACTCTGCATCAGCTCCAAACCTCGTTGAGAACAACCCTGTTGGAGTTTCAGTTTCTGATTTTCCTCCCGTTTCTGGTTTACAAGTGAGCAAGTTATCTACGAGCAGCCAGCCTCCATTGAATGTGGAGAATGTTCAGTCTGCCAACAAGTCCCTGGTTGACCAGATTCGCAGTACGCTTGATTTTGATGAAGATAGATACACTATATTTAAAGACATATCTGCTCAATATCGCCAAGGAACAATAGATACTGATACATATGTGGACTATGTGCAGCAGTTTGGCTTGTTTCATCTTGTACCTGAGTTGGCAAGACTATGTCCGGATGCTCGGAAGCAGAGAGAACTTGTGGAGTCTTACAATGCTGGTTTGCAAAGAAATGCATTTCAAGAAAGTGACAGGGTGTATGGCAGTGCTAGCACCCATCACAAGAACGGTAATGTTGACAAGAAAGGTAAAGGCAAGTCATTAGAGGTTAAGCGGAATCAACCCACTGAGAAATTAGCAGATAGCTTTTTAAGCACCGTTCATCAACTACAGTCAAATTATAAACCTTCAGAAGAGAAGTTGGAGGTGCTATCAAAGGGTGCTTATCGCATGGACAAGGGTAAATTTAAAACCGAGCTGCAGACTGATACTAACACTAGCAATCAAAATAAGATTAAACTTGGTGGGAAGACTGAAACGTCAAACGGCACTTTAACTAATCAAAATAAAGAAGACGGTGGTGGTGGGAACAAGCAACGCAAGAAAGCTTCCAAGTTCCTCAGAGTCCGCCTTGGTGATGGTTCTGCTTCGGCCCTTCTAGATCTTGATAACTCACGGGCTACATCTGATCCTAGAGAAACATACAGTTTAGATGGTAACAATAATGATTCTGGAGTTGGGCTGCCTGTACGTGGTGTTTGGCGGAAGGGGGGAGGTCAAAAACTCTTCCCCTGA 2511 0.4405 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTDCNLIFVTKALGDYTRVVNDFASLPSEVREGKVGSYWYHEDMNAFFDDVDHYKMIKAMCRLSCSECDKGEEQQNDGSRRQARFRNIGQLKGHLFHRHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHINTGDSEVDGSESERGGFMGHPMCEFCKTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQQHFLCEDDACLAKKFVVFQSESEMKRHNTMEHGGRMSRSKRNAALQIPTSFRYKHNNEQDQRRGRGRMFRRDLSENQLSMAIEASLETANAEQTYREPTSSSGQIAYEDGDADIDSIVHPFESLATAGSESTSRYRQALGHGSKPLVDSSFPPLPITSSNGQQRSKHEFEGSSSNTMAARLRRHGNRNISVINSGNAWSVAGRGPGQTSSSHSHSKKSTNHALGGSHNSSQTKTVVSGGPPPSSYANPIPSAHRTAHGQLPAGPSWDTRDNGRIVHSASAPNLVENNPVGVSVSDFPPVSGLQVSKLSTSSQPPLNVENVQSANKSLVDQIRSTLDFDEDRYTIFKDISAQYRQGTIDTDTYVDYVQQFGLFHLVPELARLCPDARKQRELVESYNAGLQRNAFQESDRVYGSASTHHKNGNVDKKGKGKSLEVKRNQPTEKLADSFLSTVHQLQSNYKPSEEKLEVLSKGAYRMDKGKFKTELQTDTNTSNQNKIKLGGKTETSNGTLTNQNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDLDNSRATSDPRETYSLDGNNNDSGVGLPVRGVWRKGGGQKLFP* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0411 836 MobiDBLite consensus disorder prediction 794 815 - -
Psa3g0411 836 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Psa3g0411 836 MobiDBLite consensus disorder prediction 442 489 - -
Psa3g0411 836 MobiDBLite consensus disorder prediction 375 399 - -
Psa3g0411 836 MobiDBLite consensus disorder prediction 794 836 - -
Psa3g0411 836 MobiDBLite consensus disorder prediction 728 773 - -
Psa3g0411 836 MobiDBLite consensus disorder prediction 732 765 - -
Psa3g0411 836 CDD RING-HC_ZNF598 5 46 IPR041888 -
Psa3g0411 836 PANTHER ZINC FINGER PROTEIN 598 1 834 IPR044288 GO:0061630|GO:0072344
Psa3g0411 836 MobiDBLite consensus disorder prediction 656 680 - -
Psa3g0411 836 PANTHER EBR1 1 834 - -
Psa3g0411 836 SMART c2h2final6 251 280 IPR013087 -
Psa3g0411 836 SMART c2h2final6 220 250 IPR013087 -
Psa3g0411 836 SMART c2h2final6 196 219 IPR013087 -
Psa3g0411 836 SMART c2h2final6 108 144 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0411 1 831 C2H2 Transcription Factor Family AT3G62240 51.373 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0411 K22381 - gmx:100780426 1306.97