Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0403 ATGGATATTGAAATAGTTTCTAGAGAAATGATCAAACCTTCATCACCAACTCCTTCTCACCTTAGAATATATCCACTTTCTTTCATAGACAACATGTTTGTGTGTAATGTTCCATTACTCTTGTTTTACAACCCAGACAAGAGCAGTGATCAAAACTCAAAAATATCACAACTCAAAAGATCATTATCTAATGTTCTATCCAAATACTATATTTTTGCTGGCAAATTGAATGATAGAATTACTATTGAATGTAATGATCAAGGTGTTCCGTTTCTGGTGACAAAGATAAAAAATAAACTATCCGATATCCTCAAACATCCGGAAGAAAATTTGTTGAACTCTTTGTTCGCCGACGGGTTGCAATGGAAACAAACATATTCAAGTTACGCTTTAGTAGCCATTCAAATAAATTGTTTTGAATGTGGAGGAATGGCTATAAGTATTTGCATGAATCACAAATGTGGAGATGCTTCCACACTTTTTAACTTCATGAAGGAATGGGCTATTATCAATAAAAAATTAGAAGAAGAAAATGGAGAAGAGTTATTAATATTACCCTTTCCTTTACTTGAGGGAGGAGCATCAATTTTTCCTCAAAAGAACTTACCTATTTTCCCAGAATATACTCTCAATATAAAAAAGAATATGGTGTATAAAAGATTTGTATTTCAACCCTCAATAATTAAGTTTCTCCAGGAATTGGCAAGTTCTAGTTCCGTACTTTATCCCTCACGAGTCCTAGTTGTAAAAGCTTGGATTTACAAGCATGTCGTTTTATCAATGGGATTAAATTTCAAGACATCCTCATTTCAAATGGCCGTAAACCTTCGCAAAAGAATGATTCCTCCATTGTCTGAAAATTGTGTGGGAAATATAGTCTGGATGTCATCCATGTTCGCCGATAAGGAGGAAATGGAGTTGAAAGATGTAGTCTACAAAATAAAAGAAGGGTTATCTGAATTTTGTGACGTTTATCCAAAATTATTTGGAGGAAATAATTTTTCGTTGTTATCTGAGTTCTTGAATAAAAATATTGATCTTAAATCTAAGACAAAAGATGAGATTGGTTTTAGTAGTTGGTGTAATTTTCCAATATATGAAGTAGATTTTGGATGGGAAAAACCAACATGGGTTACTACTTGTGGTTGTCCTTGGAAGAATTTCACAATTCTGATGGATAGAAAAGATGGAAATGGGATTGATGCGATCATGAGCATGGAAGAGAATCATATGACTAAATTTGAGCATGAATATATGGAGCTCCTTCGATATGCCTCTCCTAAGGTTATGACAAACTCAAAGACTGCTACTTATGGTTTTTCTTAG 1326 0.3356 MDIEIVSREMIKPSSPTPSHLRIYPLSFIDNMFVCNVPLLLFYNPDKSSDQNSKISQLKRSLSNVLSKYYIFAGKLNDRITIECNDQGVPFLVTKIKNKLSDILKHPEENLLNSLFADGLQWKQTYSSYALVAIQINCFECGGMAISICMNHKCGDASTLFNFMKEWAIINKKLEEENGEELLILPFPLLEGGASIFPQKNLPIFPEYTLNIKKNMVYKRFVFQPSIIKFLQELASSSSVLYPSRVLVVKAWIYKHVVLSMGLNFKTSSFQMAVNLRKRMIPPLSENCVGNIVWMSSMFADKEEMELKDVVYKIKEGLSEFCDVYPKLFGGNNFSLLSEFLNKNIDLKSKTKDEIGFSSWCNFPIYEVDFGWEKPTWVTTCGCPWKNFTILMDRKDGNGIDAIMSMEENHMTKFEHEYMELLRYASPKVMTNSKTATYGFS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0403 441 Gene3D - 213 425 IPR023213 -
Psa3g0403 441 Pfam Transferase family 1 418 - -
Psa3g0403 441 Gene3D - 1 203 IPR023213 -
Psa3g0403 441 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 428 - -
Psa3g0403 441 PANTHER F21J9.9 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0403 Psa-Chr3 37854845 37856271 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0403 1 421 Monolignol Biosynthesis Gene Families AT5G48930 22.391 6.88e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0403 - - gmx:100806928 412.92