Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0396 ATGTGCACAATTGGTTACGGTGACATAGCTCCATTAACACCAATGACTAAGCTTTTCGCTTGTGTTTTTGTTTTAGTAGGGTTTGGTTTCATAGATATACTCTTGAGTGGCCTTGTTAATTTCGTTTTAGATTTGCAAGAAAACACTATTTTAACCGGTCTTCAAATGGGGGCTAGAGACGGTTTTTCTGCTAGGGATTACATTGTTGATGTTGCCAAAGGTAGGATGAGGATTCGGTTGAAAGTTGGTTTAGCACTTGGAGTTGTTGTTCTTTGTATTGGTGTTGGGAGTTTGGTTTTGTGTTTTGTTGAGGGTTTGAATTGGGTTGATTCTGTTTATTTGGCTGTTATGTCTGTTACGACGGTTGGTTATGGTGATCGGGCTTTTACGACGCTTCCGGGGAGATTGTTTGCGGCGATTTGGTTGTTGTTTTCTACTTTGATGGTTGCTAGGGCTTTTCTGTATTTGGCTGAGGCTAGAATTGATAGAAGACATAGGAGATTGGCTAAGATGGTTTTGCATAGAGAGATTACTATTGAAGATTGGCTTGCTGCTGATATCAACAATACTGGTTTTATTAGTAAGTCAGAATATGTGATCTTCAAGCTGAAAGAGATGGGAAAAATACAAGACAAAGATGTAATGCAAATTTGTGATCAATTCAGGAAGCTGGATCCCTCTAACTGTGGGAAGATAACATTACCTCATCTCTTAGAGGGAAGAACATGA 729 0.3923 MCTIGYGDIAPLTPMTKLFACVFVLVGFGFIDILLSGLVNFVLDLQENTILTGLQMGARDGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIGVGSLVLCFVEGLNWVDSVYLAVMSVTTVGYGDRAFTTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRLAKMVLHREITIEDWLAADINNTGFISKSEYVIFKLKEMGKIQDKDVMQICDQFRKLDPSNCGKITLPHLLEGRT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0396 242 Pfam Ion channel 89 158 IPR013099 -
Psa3g0396 242 Pfam Ion channel 2 42 IPR013099 -
Psa3g0396 242 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 1 238 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa3g0396 242 Gene3D - 1 49 - -
Psa3g0396 242 SUPERFAMILY Voltage-gated potassium channels 1 46 - -
Psa3g0396 242 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 1 238 - -
Psa3g0396 242 SUPERFAMILY Voltage-gated potassium channels 72 181 - -
Psa3g0396 242 Gene3D - 66 184 - -
Psa3g0396 242 ProSitePatterns EF-hand calcium-binding domain. 186 198 IPR018247 -
Psa3g0396 242 SUPERFAMILY EF-hand 182 237 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0396 Psa-Chr3 37366262 37368983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0396 1 238 Ion Channels AT4G01840 71.721 1.20e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0396 K05389 - gmx:100780438 416.001