Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0395 ATGGCAATGTCTGTGATTAGAACAAAACAAGACCTAGTTAGACCTGCAAAGGAGACACCATTGGTCACACTAGACTTGTCGGTAATCGACAGATTACCTGTTTTAAGATGCAATGTTAGAACCTTGCATGTGTTTAGACATGGCCCTGAAGCAACAAGGGTCATAAGAGAGGCATTGTCCCTAGCACTTGTTCCCTACTACCCTCTTGCAGGACGGCTCAAAGAGTCTAAACCATGGTGCCTCCAAATCGAGTGTTCGGGTGATGGTGTGTGGTACGTTGAGGCATCAACTGATTGCAGACTTGACTCTGTCAATTTCTTTAATGACATGGAGTCGATTCCCTATGATGATCTTCTTCCCAATGATGTTCAGAAGATCGGACAAATTGAACCCCTTGTGAAAATGCAGGTGACACAATTTGGTTGTGGGGGTTTTGTGATAGGCCTGGTATTCAGCCATAGCATTTGTGATGGCCTTGGCGCTGCACAATTTCTGAATGCGGTTGGGGAGCTAGCTAGAGGACTTGACAAGCCCACCATTGAACCAGTGTGGTACAGAAACTTATCTCCCTCTCCTCAAGCACATGCATTGCCGAAACTACCTATAACAGGTCCACATAAAATGCCACACTACAAGCTAGAGAATTCTAACATAGACATGACTATGGATCAAATCAACCGGCTGAAAAGACAGTTTCAACAAGTAACTAGGCGAGGTTGTTCTACCTTTGAAATTGTTGCTGCTTTGTTTTGGAGCAGCAGAACAAGAGCCATTAATTTTGATCCCAATACTCAAGTGAAGCTTGTGTTCTTTGCAAATTGTCGACACCTCATAGACCCTCCTCTACCCAATGGTTTCTATGGAAACTGTTTCTTCCCAGTGACAACTACAACTTCATGCGAGTCACTTGGAAAAGCAGTAAATATCATTGAAGTGGTAAAGCTGATTCAAGAGGCGAAGTCCAGGTTACCATTAGAGTTTGATAAGTACTTGAAGGGTGACCATATAAAATGTGGCAATGAGGATGAGGAGGACCCGTTTGCACCTACACCGAATTACGCCACACTCTTTATGTCTGAGTGGGGGAGGTTGGGATTTGACAATGTGGACTATCAGTGGGGTCCACCTGTCCATGTGGTCCCCATTCAAGGCTCTGTCATTGTGCCAGCTGGCATTGTGCGCTCGCTGCCACTCCCAAATAGAGGGATTCGTTTGGTTACATGGTGCGTGGGGGAGGCACATCTCCCTCCCTTCATTGATCAAATTCATGGTCTTATAAATCAGCAACTTTTATAA 1296 0.4491 MAMSVIRTKQDLVRPAKETPLVTLDLSVIDRLPVLRCNVRTLHVFRHGPEATRVIREALSLALVPYYPLAGRLKESKPWCLQIECSGDGVWYVEASTDCRLDSVNFFNDMESIPYDDLLPNDVQKIGQIEPLVKMQVTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGELARGLDKPTIEPVWYRNLSPSPQAHALPKLPITGPHKMPHYKLENSNIDMTMDQINRLKRQFQQVTRRGCSTFEIVAALFWSSRTRAINFDPNTQVKLVFFANCRHLIDPPLPNGFYGNCFFPVTTTTSCESLGKAVNIIEVVKLIQEAKSRLPLEFDKYLKGDHIKCGNEDEEDPFAPTPNYATLFMSEWGRLGFDNVDYQWGPPVHVVPIQGSVIVPAGIVRSLPLPNRGIRLVTWCVGEAHLPPFIDQIHGLINQQLL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0395 431 Pfam Transferase family 4 382 - -
Psa3g0395 431 Gene3D - 202 419 IPR023213 -
Psa3g0395 431 Coils Coil 218 238 - -
Psa3g0395 431 PANTHER ACYL TRANSFERASE 4 1 423 - -
Psa3g0395 431 Gene3D - 1 199 IPR023213 -
Psa3g0395 431 PANTHER ACYL TRANSFERASE 4 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0395 Psa-Chr3 37309966 37311630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0395 12 418 Monolignol Biosynthesis Gene Families AT5G48930 28.864 1.33e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0395 - - gmx:100783128 616.305