Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0371 ATGATGAAACTGATTCTCATTATAACGTTTTCTTTCGTTATCTCAGTTATTAGATCTGAGACTCAGAAAGAGACTCTTTCTCCTCTGTATATGTTGGAAAACGATGACTTTTCAGCTAAAGTTCCTTCTTCCAAACCTCAACCTCTCATGGTGCCACTCACTCTTATTCAAGGAGCTGATTCTAAAGGAGCAGTATGTTTGGATGGAACATTGCCTGGTTACCACTTGCATCCTGGATCTGGATCTGGTGTGAATAATTGGATAGTTAATTTAGAGGGAGGAGGATGGTGTAACAATATCAGAACTTGTGTGTTTAGAAAAACTACTCGGCGCGGTTCGTCGAAATACATGGATAAGCAAATACCATTCACAGGGATATTGAGCAATAAAGCTGAAGAAAATCCTGATTTTTTTAACTGGAATCGAGTCAAAGTGCGGTACTGCGATGGCGCATCTTTCGGCGGAGACAGTGAAAATAAGGCTGCAAACCTTCAATTTAGAGGGCAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCGAAGGGACTGAAGAACGCTAAACAGGCTCTTTTGTCCGGATGCTCTGCGGGCGGTCTGGCAACTATACTACATTGTGACGAATTCGGAAGCTTGTTTCCAAAATCTACCAAAGTGAAATGTTTCAGTGATGCAGGGTTTTTTCTTGACGCAACCGATGTATCGGGCGGACGCACGTTGAGGAAAATGTTCGGAGGCGTTGTTAGCTTACAGGAAGTGCAAAAGAATCTGCCCGAAAGTTGTCTTAACCACCTCGATCCAACTTCGTGCTTCTTTCCTGAAAACTTGATAGACCATATTCAAACTCCGCTGTTTCTGCTAAACGCGGCTTATGATGGATGGCAGTTGTACGAAAGTTTAGCCCCGTCTACGGCCGATCCCCATGGCTATTGGAAAGCTTGTAAACTGAATCAGACGAATTGTAACTCGACTCAAATTGAGTTCCTCCAAAAGTTCAGGAATCAAATGCTAAACGACGTAAAAGGATTCTCAGCGACATCTCAATCCGGACTATTCATAAACTCTTGTTTTACGCATTGTCAATCCGAGAGACAAGATACATGGTTTGCTGACGACTCTCCGCTCCTTAACAACACGCGGATTGCGAAGGCAGTTGGAAATTGGTTTTTCGATCGTCAAGTTGTTAAAGAAATTGATTGTCCTTATCCGTGCGACAAAACCTGCCATAGTCTGTTCTCGTGA 1242 0.4283 MMKLILIITFSFVISVIRSETQKETLSPLYMLENDDFSAKVPSSKPQPLMVPLTLIQGADSKGAVCLDGTLPGYHLHPGSGSGVNNWIVNLEGGGWCNNIRTCVFRKTTRRGSSKYMDKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFGGDSENKAANLQFRGQKIWLAAMEELMSKGLKNAKQALLSGCSAGGLATILHCDEFGSLFPKSTKVKCFSDAGFFLDATDVSGGRTLRKMFGGVVSLQEVQKNLPESCLNHLDPTSCFFPENLIDHIQTPLFLLNAAYDGWQLYESLAPSTADPHGYWKACKLNQTNCNSTQIEFLQKFRNQMLNDVKGFSATSQSGLFINSCFTHCQSERQDTWFADDSPLLNNTRIAKAVGNWFFDRQVVKEIDCPYPCDKTCHSLFS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0371 413 Pfam Pectinacetylesterase 45 394 IPR004963 GO:0016787
Psa3g0371 413 PANTHER NOTUM-RELATED 2 411 IPR004963 GO:0016787
Psa3g0371 413 PANTHER PECTIN ACETYLESTERASE 2 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0371 Psa-Chr3 35424779 35427683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0371 27 411 Carbohydrate Esterase AT1G57590 67.617 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0371 K19882 - gmx:100785270 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0371 3 35424779 35427683 Psa6g3626 6 307422916 307426074 PCT