Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0369 ATGGCGTCTTCCTTCTCAACTCAATTACTTCAATCTCAGTACGCACTTTCTCATCTTCAGGGTAATTTTAGCCATGATGTGTCTCTGGTTCAAAGGTCACAAAAGGTATCACGGATTGGTTACAGTAAATCATTACCATCAAAATCACATTTTTCTTTGAAGTTTTCAACCACACAACGATCTGGACCAAGATCAATTAGATATAGGAGAGTTACATGTGCTGCTGCTGCTGCTGAAAATGTTCAAGAGCTGCAAGCCAAAGTGACTACCAAATGCTTCTTTGATGTAGATGTTGGGGGTAACGCTATCGGCACAATCGTTTTGGGCTTGTTCGGAGAGGTTGCTCCTAAAACAGTTGAAAATTTCCGCGCTTTATGCACAGGAGAGAAAGGATATGGTTACCAAGGATCCTCCTTCCATCGCATAATCAAAGAATTCATGATTCAGGGAGGGGACTTCACTGAAGGAAATGGAACCGGTGGAAAAAGTATCTATGGTTCTAGTTTTGAAGACGAGAGTTTTGCGTTGAAACATGTTGGTCCTGGAGTTTTGAGCATGGCTAATGCGGGTCCTAATACCAACGGTAGTCAATTTTTTATTTGCACTGTAAAGACTCCATGGTTAGATGATCGACATGTTGTATTTGGACATGTGATTGATGGAATGGATGTTGTGAGGACACTTGAGTCTCAAGAAACAAGCAGGTTAGATATCCCTACAAAGCCTTGCAGAATTGTTAAATGCGGAGAATTGCCTCTAGATGGTTGA 768 0.4141 MASSFSTQLLQSQYALSHLQGNFSHDVSLVQRSQKVSRIGYSKSLPSKSHFSLKFSTTQRSGPRSIRYRRVTCAAAAAENVQELQAKVTTKCFFDVDVGGNAIGTIVLGLFGEVAPKTVENFRALCTGEKGYGYQGSSFHRIIKEFMIQGGDFTEGNGTGGKSIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDDRHVVFGHVIDGMDVVRTLESQETSRLDIPTKPCRIVKCGELPLDG* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0369 255 SUPERFAMILY Cyclophilin-like 87 251 IPR029000 -
Psa3g0369 255 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 134 151 IPR020892 GO:0003755|GO:0006457
Psa3g0369 255 Gene3D - 75 254 IPR029000 -
Psa3g0369 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 47 254 - -
Psa3g0369 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 IPR002130 GO:0000413|GO:0003755
Psa3g0369 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 IPR002130 GO:0000413|GO:0003755
Psa3g0369 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 182 197 IPR002130 GO:0000413|GO:0003755
Psa3g0369 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 197 209 IPR002130 GO:0000413|GO:0003755
Psa3g0369 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 210 225 IPR002130 GO:0000413|GO:0003755
Psa3g0369 255 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 97 249 IPR002130 GO:0000413|GO:0003755
Psa3g0369 255 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 93 250 IPR002130 GO:0000413|GO:0003755
Psa3g0369 255 CDD cyclophilin_ABH_like 91 249 - -
Psa3g0369 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 47 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0369 Psa-Chr3 35397008 35399713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0369 104 248 U-box Gene Family AT5G67530 44.521 1.12e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0369 K03768 - gmx:100785805 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0369 3 35397008 35399713 Psa3g0369 3 35397008 35399713 ECH