Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0359 ATGAAGCCACCTAATCTGTCCCATCGCCATTTTCATCTCCGACCGCCGGTAACAGAAACAATTTCCACTCCTTCAATCACCATGTTGAAGTTCAATACATGGCCCAACACAACCCCAACCGTAACCCTATTCAATCTCAAGTGCTTAACCTCCCCACAACCATCACCATCACCATCACCATCCTCTGTGCATTTCGATTCAACCCCATTCCTCTTCCAAGTCTCCTACCTCATCAACAATTTCAATTTCTCCCCAGAATCCGCCTCCAAACTTTGCTCCACCAACCGTCTTTATTTCAAAACCGCCCAAAACCCTGACTCCGTTATCAACTTTTTTAGAAACTACGGTTTCTCTAATTCCCAGTTATGCGACATCATTACCAGGTCACCATGGTTACTTTCCTGCAGCCTCTCCAAAAGGGTGTTGCCAAAGTTTGAGTTTCTTCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTGTCAGTAAGAACTCTAGAGTCTTGGCTCCTAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGCTTTATAGATTCTTGCAATCAGACAAGGAAGTTATTGCTTATGCAATTCACACTCCAGATTTACTCACTCACCGTCTTGTGCCGGGTAACATTACAATGCTGGTTCAGAATGGAGTGTCTGACTCAAATATTCGGAGAATTCTTCGAATCAGGAGTCGGTCAATGGATGCGCGCGACATGGGGGGTTTAGTCCAGGAATTGACGGATTTGGGGTTTAATCCTTCAAAATATGTTTTTGCTGTAGCATTGATTGCCAAAACATCAGTACCCAAAACTAGGTGGAAGGAGAAAGTCGATGCCTTTAAGAACTGGGGTTGGTCTGATGAAGATGTTATTGAAGCATTTAAAAAGCAACCTTATTGTATGTTAACATCCATTGAGAAAATTAACTTAGTGATGGATTTCTGGGTAAACCAATTGGGCTGGGATGCTATGGCTCTCGCCAAACAACCCAACGTTTTGTGCTTTAGTTTCGAAAAAAGGATCATTCCAAGGGCCTCGGTTATGCAATTTCTTTTGATGAATGGTTTGAGAAATAAGAACGTGAGCTTGACTTCTCCGTTTGTACCACCTGAGAAGGTGTTTCGTGATAGGTTTATAAAACGTTTTGAGAATGAGTCTTCATATCTATTAAACTTGTACGAGGAGAAACTCAAGCTTGCATACACCGGGGACGAAAATTGCGTGTCGTGA 1242 0.4251 MKPPNLSHRHFHLRPPVTETISTPSITMLKFNTWPNTTPTVTLFNLKCLTSPQPSPSPSPSSVHFDSTPFLFQVSYLINNFNFSPESASKLCSTNRLYFKTAQNPDSVINFFRNYGFSNSQLCDIITRSPWLLSCSLSKRVLPKFEFLLSKGASNSDIVNLVSKNSRVLAPSLENHIVPTYELLYRFLQSDKEVIAYAIHTPDLLTHRLVPGNITMLVQNGVSDSNIRRILRIRSRSMDARDMGGLVQELTDLGFNPSKYVFAVALIAKTSVPKTRWKEKVDAFKNWGWSDEDVIEAFKKQPYCMLTSIEKINLVMDFWVNQLGWDAMALAKQPNVLCFSFEKRIIPRASVMQFLLMNGLRNKNVSLTSPFVPPEKVFRDRFIKRFENESSYLLNLYEEKLKLAYTGDENCVS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0359 413 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 63 405 - -
Psa3g0359 413 PANTHER CGI-12 PROTEIN-RELATED 63 405 IPR003690 GO:0003690|GO:0006355
Psa3g0359 413 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Psa3g0359 413 SMART mt_12 159 190 IPR003690 GO:0003690|GO:0006355
Psa3g0359 413 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Psa3g0359 413 SMART mt_12 327 361 IPR003690 GO:0003690|GO:0006355
Psa3g0359 413 Pfam mTERF 109 237 IPR003690 GO:0003690|GO:0006355
Psa3g0359 413 Pfam mTERF 274 378 IPR003690 GO:0003690|GO:0006355
Psa3g0359 413 Gene3D Transcription termination factor 3, mitochondrial 86 210 IPR038538 -
Psa3g0359 413 Gene3D Transcription termination factor 3, mitochondrial 211 389 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0359 Psa-Chr3 35021114 35023128 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Psa3g0359 mTERF 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0359 K15032 - gmx:102663414 328.561