Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0358 ATGGGCACTGCTACCTGCATCGATATTATCCTTGCCATCATCCTTCCACCTCTCGGTGTCTTCCTCAAGTTTGGCTGCAACGTTGAGTTCTGGATCTGTTTGATTCTCACCATTTTGGGCTATCTTCCAGGAATTATCTATGCAATTTATGCTATCACTAAGTAA 165 0.4303 MGTATCIDIILAIILPPLGVFLKFGCNVEFWICLILTILGYLPGIIYAIYAITK* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0358 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
Psa3g0358 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 54 IPR000612 GO:0016021
Psa3g0358 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Psa3g0358 54 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0358 Psa-Chr3 34854652 34856329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0358 1 54 RCI2 Gene Family AT3G05890 81.481 8.49e-27 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0358 - - aof:109840179 96.6709