Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0357 ATGGGTACAGCTACCTTCGTCGATATCCTTCTTGCCATCGTTCTCCCACCTCTTGGTGTCTTCTCCAAGCTTGGCTTAGAAGAGGAGTTCTGGATCTGTTTGATTCTCACTCTTTTTGGCTATCTTCCTGGAATTCTCTATGCTATTTACATTATCACTAAGTGA 165 0.4303 MGTATFVDILLAIVLPPLGVFSKLGLEEEFWICLILTLFGYLPGILYAIYIITK* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0357 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
Psa3g0357 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 54 IPR000612 GO:0016021
Psa3g0357 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Psa3g0357 54 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0357 Psa-Chr3 34806147 34807551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0357 1 54 RCI2 Gene Family AT3G05890 81.481 3.74e-26 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0357 - - pvy:116137779 97.0561