Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0356 ATGAGTACAGCTACCTTCATTGATATCATTCTTGCCATCCTCCTCCCACCTCTTGGTGTCTTCCTCAAGTTTGGCTGTGAAGTGGAGTTTTGGATCTGTTTGGTGCTCACTCTTTTTGGCTATCTTCCTGGAATTCTCTATGCTATTTACATTATCACTAAGTGA 165 0.4182 MSTATFIDIILAILLPPLGVFLKFGCEVEFWICLVLTLFGYLPGILYAIYIITK* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0356 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 54 IPR000612 GO:0016021
Psa3g0356 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Psa3g0356 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
Psa3g0356 54 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0356 Psa-Chr3 34755940 34757301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0356 1 54 RCI2 Gene Family AT3G05890 88.889 1.94e-30 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0356 - - ath:AT3G05890 102.449