Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0347 ATGGGCGGAGTTGGAGCAGCAGCACCGAACACGGAGGTTCAATACACCACGGCGAAGATTTCCGTATGGTGGGATATAGAAAACTGTCACGTTCCCAAGGGTTTCGATCCTCACCAAATAGCACAGAATATCAGTTCAGCGCTTGTTCGGATGAACTTCTGCGGCCCCGTTTCGATCTCTTCCTACGGCGATACAACTAGGATTCCCGCGTCTGTTCAGCATGCTCTCTCCAGCACCGGAATTTCCCTCAATCATGTTCCTGCTGGTGTGAAAGATGCAAGTGATAAGAAGATCCTTGTCGACATGCTGTTTTGGGCAGTGGACAACCCTGCACCTGCAAACTATTTATTGATTTCAGGTGATCGAGATTTCTCTAATGCCCTCCATCAATTGCGAATGAGGAGGTATAATATTCTTCTTGCACAACCTCAAAAAGCATCTGCTCCCCTAGTCGCAGCTGCTAAGAACGTATGGCTTTGGACTAGTCTCTTATCCGGAGGACCTCCGTTATCTAATGGAGAATCACAACAGCTTGGTAATGGTAGTCTCCTATCATCTTCTGAAACTTTACAAGTTCCTGTATCAAATGCCACTCAGACACAACAACAAGGGGGTCCCTACTCTGAAGTTCATCCTGGAAATTCAAAATATCAAAATGGAGGAAGGGGGTTTGATTCTAGATATCAGGGGAGGCCGAATTGGAGAAACCCGAATCAACCTAATGGGTCCAAAGCCATGAGTCCACCTCCAGTTGGACCTCAAGATAACCGTAATAACGTAAACAATTATCGACCTGGCAACTATAATCCAAATGCTCCTCATAGCGGCCCTGCCATGAATTTTGTCCGCGCCAATTCTGATCAGTTATGGAGCAATAATGGCCATCAACATCCTTATTCCCAACCATTAAGACCGAACGACTTCCCATTGCAGCCTCCTTTTGCACCTAGTAATTCATTTTCTCCAAATTCCCATACTTTTGCAACTACACCGGTGCCACCTAGGACTAGTGGCCCCAATTTCGGTACAGGATCAAATACACCTGTGCCAAACATTGGTAATCTGAACATTTCTGGTCATCCTAATAATGCTCATAACCCCCGTACTGTTCCGCAACGGAGTGGAGAGTTGAAACCTAATCCTAAGGGTACTCCACTTCTGGTAAGATCAACGAATGAACAAAATGGACATATGGTGCATAGCAGTAGCACGCAAGGCTATCCACATGGTCCACCAGAATATCAACCTACATCGTCGGCAGCAATGGGTAATAATAATAAACTTCCTGCTAATGGTAAGTGGGGATCTTCAGGAATTTCTAAACCTTCTGAATATGTACAAGGCCTTATAGGGGTTGTATTACTTGCCCTTAACTCACTAAAAAATGCAAAGATGATGCCGACTGAGAAAAATATTACTGATAGCATCCGTTATGGAGATTCCAAGCATCGCAACACTGATGTTAAGAAGGCTCTGGAGAGTGCAATGGAGCAGCAGATGGTGGTGAAACAGAATTTAGGTGCTCTGACGTTGTATGTAGGTAAGAATGATAAACTTTGGAAATGTGTAAATCCTTTAGGTGGAAATCCTAAACAGCACTCAAAAGAAATTTGGGATGAAATTCAAAATTTTTTAACAACCCCTGCTGGAAGATCAGCAATAATGGGTACACAGTGCAAGTATGAAGCAGGTATGGTGATAAAGAACATGTGCTTTAAAGATCTTGCTTTGGGCGATGTCCTTCAGATATTGAATATGTTGATTCTCCATAAAAAATGGATAGTTCATCAGCAGTCTGGCTGGCAACCACTCATCCTTACTCTTCCTGAGTCAAATCTCGATTCAGGGGTCACCGCTGGTGCATAG 1866 0.4405 MGGVGAAAPNTEVQYTTAKISVWWDIENCHVPKGFDPHQIAQNISSALVRMNFCGPVSISSYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKNVWLWTSLLSGGPPLSNGESQQLGNGSLLSSSETLQVPVSNATQTQQQGGPYSEVHPGNSKYQNGGRGFDSRYQGRPNWRNPNQPNGSKAMSPPPVGPQDNRNNVNNYRPGNYNPNAPHSGPAMNFVRANSDQLWSNNGHQHPYSQPLRPNDFPLQPPFAPSNSFSPNSHTFATTPVPPRTSGPNFGTGSNTPVPNIGNLNISGHPNNAHNPRTVPQRSGELKPNPKGTPLLVRSTNEQNGHMVHSSSTQGYPHGPPEYQPTSSAAMGNNNKLPANGKWGSSGISKPSEYVQGLIGVVLLALNSLKNAKMMPTEKNITDSIRYGDSKHRNTDVKKALESAMEQQMVVKQNLGALTLYVGKNDKLWKCVNPLGGNPKQHSKEIWDEIQNFLTTPAGRSAIMGTQCKYEAGMVIKNMCFKDLALGDVLQILNMLILHKKWIVHQQSGWQPLILTLPESNLDSGVTAGA* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0347 621 Pfam OST-HTH Associated domain 558 604 IPR025677 -
Psa3g0347 621 CDD PIN_limkain_b1_N_like 19 143 - -
Psa3g0347 621 MobiDBLite consensus disorder prediction 196 217 - -
Psa3g0347 621 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 606 - -
Psa3g0347 621 Pfam NYN domain 19 156 IPR021139 GO:0004540
Psa3g0347 621 Gene3D - 12 162 - -
Psa3g0347 621 PANTHER LIMKAIN B LKAP 2 606 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0347 Psa-Chr3 33955973 33960890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0347 12 208 C2H2 Transcription Factor Family AT5G61190 68.342 4.24e-84 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0347 - - gmx:100794608 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0347 3 33955973 33960890 Psa3g0347 3 33955973 33960890 ECH