Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0336 ATGGGCTCTAATTTGAATGCTGAATTATCAAAGAAAACTGTTTTTGGTGTAAAGGTTTGGGAAGTGATTGCAATTGTTGTTGCTTTGTCAATTATAGTGATTCTCTCTGTGGTTTCAATATGTCTTACTTCAAGAAAGAAATCTAGGAGAGCTAGAAACAAGATTCCTGTTACTGAGATACCAAATGTGTCGAAGGAAATTAAGGAAGTTAGGGTTGAGCAAGTATCGACGAATGGATTTGCGCCGCGTGATGGAATACTTTTAACCATTCATGATAAATCTAGTGATAAAGAGTCTGATAAAGTTATGGTTCATTTAGATTTAGGGAAGAAGATGAAGAATGGTGATAGTAGTAGTCATTCGGAATCGTTTCATCAGTACATGGAGAAAGATGGTGGTGGGTCGCATTCGCAATCGGGTGAAGAAGGTAGCTCCGGAACGGTTACTGTCTATAAGCAGTCTTCTTCTTCGTACCCTATAACAGCTCCTTCGCCTCTATCTGGTCTTCCGGAATTCTCGCACTTAGGTTGGGGTCATTGGTTTACTTTGAGGGATCTTGAACTTGCTACGAGCCGTTTCGCGAAAGAAAATGTTCTCGGTGAAGGGGGTTATGGAGTGGTATATAAGGGACAGTTGATCAATGGAAGTCCAGTTGCGGTGAAAAAGATACTCAATAATATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCAGACACAAAAACTTGGTTCGCCTTTTGGGGTTCTGCGTTGAGGGAACTCACAGGATTTTAGTCTACGAGTATGTGAATAATGGAAACTTGGAGCAATGGCTTCATGGAGCTATGCGTCACCATGGCTATCTTACATGGGAAGCACGTGTCAAGGTTCTCCTTGGCACAGCCAAAGCGCTTGCGTATTTGCACGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCGAGCAACATATTAATCGACGATGATTTCAATGCTAAGGTTTCTGATTTTGGTCTGGCCAAGTTATTGGGTGCCGGGAAGAGTCATGTCACAACCCGAGTAATGGGAACCTTTGGATACGTGGCTCCTGAATACGCAAACACTGGCCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATTACGGGAAGAGATCCCGTTGATTATGGCCGTCCGACAAATGAAGTGAATCTAGTTGATTGGCTGAAGATGATGGTTGGAAGCCGAAGATCAGAAGAAGTGGTGGACCCGAACATTGAGGTGAAACCATCGACAAGAGCTCTGAAACGCGCTCTCTTAACTGCTTTAAGATGCGTTGATCCAGATTCGGAGAAAAGACCCAAGATGAGCCAAGTTGTACGAATGCTGGAGTCCGAGGAATACCCTTTAGCAAGAGAGGACCGAAGGCACAGGAGAAGAAATCAAGGAGGCAGTGCAGAAATTGAATCGCAGAGGGAATTTTCCGACACGGACAGGAGTGAGATTCAGGGCTCTAGAGAAGAGAGCAGAGGGTAG 1539 0.4373 MGSNLNAELSKKTVFGVKVWEVIAIVVALSIIVILSVVSICLTSRKKSRRARNKIPVTEIPNVSKEIKEVRVEQVSTNGFAPRDGILLTIHDKSSDKESDKVMVHLDLGKKMKNGDSSSHSESFHQYMEKDGGGSHSQSGEEGSSGTVTVYKQSSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATSRFAKENVLGEGGYGVVYKGQLINGSPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARVKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPTNEVNLVDWLKMMVGSRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPLAREDRRHRRRNQGGSAEIESQREFSDTDRSEIQGSREESRG* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0336 512 SUPERFAMILY Protein kinase-like (PK-like) 177 470 IPR011009 -
Psa3g0336 512 PANTHER OS01G0323000 PROTEIN 3 511 - -
Psa3g0336 512 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 511 - -
Psa3g0336 512 MobiDBLite consensus disorder prediction 113 129 - -
Psa3g0336 512 Gene3D Transferase(Phosphotransferase) domain 1 269 481 - -
Psa3g0336 512 CDD STKc_IRAK 199 465 - -
Psa3g0336 512 ProSiteProfiles Protein kinase domain profile. 193 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0336 512 Pfam Protein kinase domain 194 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0336 512 MobiDBLite consensus disorder prediction 113 150 - -
Psa3g0336 512 ProSitePatterns Protein kinases ATP-binding region signature. 199 222 IPR017441 GO:0005524
Psa3g0336 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 315 327 IPR008271 GO:0004672|GO:0006468
Psa3g0336 512 MobiDBLite consensus disorder prediction 465 512 - -
Psa3g0336 512 SMART serkin_6 193 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0336 512 Gene3D Phosphorylase Kinase; domain 1 175 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0336 Psa-Chr3 33597965 33602121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0336 133 467 Trihelix Transcription Factor Family AT1G70460 46.765 5.37e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Psa3g0336 Pkinase 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0336 - - gmx:100787014 874.389