Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0335 ATGGGTTTTTCTAGCTTTGTTCCATGCATATTAATGCTTGTTATTCAATTAGCTTATGCTGTGATGAATGTTACTTCAAAGCTTGCCATTGCTGGTGGCATGAATCCTCTCATCCTTGTTGCTTATCGTCAAATCTTTGGAACTGTTTCCATTGCTCCCTTTGCTTATTGGCTTGAACGGGATATGATTCCAAAGATGACAAAGCGTATTATGATTCAAATATTTTTATCTTCAATAACAGGAGTAACAGGAAATCAAGTTCTGTATTTTGTGGGGCTAAAATTTTCAACAGCAACAATTGCATGTGCACTCACAAATTTGCTTCCGGCTTTTACATTTATACTTGCAATCCTCTTCAGACAGGAGAATTTGAGGATAAAGAAGAAAAGTGGTATAGCAAAGGTGGTAGGAACAGTTTTGTGTGTGGGAGGAGCAATACTTTTATCATTCTACCATGGACAAGTAATTGGTATTGGTAAATCAAGTATTCATTGGGGTTATGCTGAGAAAGTTCAAAGTGGTGGTGATAACTCCAATGCTTCTACCTCTGGCTCATTTTTAGGCCCTGTTCTCTTAATTCTCAGTGCTCTTATTTGGTCCGCATGGTTTATCATTCAAGCGGATATGAGCAAGAACTTTCCCGTACCTTATACAAGCACAACATACATGTGTTTTTTGGCGAGTTTTCAGTGTATGTTCATTGCTTTGTGTTTCGATCACAAAGCTTCATCTTGGTCACTCCATGATGCTATGAGAGTTACCTCTTCTGTTTACTCGGGAGTAATTTGCACTGGGCTTACATATTGTATAATATCATGGACAATTGAGAGAAAAGGGCCACTTTATGTGTCTGTATATACTCCATTGCAGCTTATTCTCACAGCTATTATTAGTTGGGCTTTTATGAGTGAGAAATTATACGTTGGAACTGCTATTGGGTCATTGTTGATAATTTTTGGACTTTATGGTGTTCTATGGGGAAAGAGCCAAGAAGTTGATAACATGAAATTGGAAGATGCTACTGATCAAGATGAAGGTATTAAGAATGATGACATGGAAATGCAATCTTATGTAATGCCATCATCCAATGGTAATGGCAATGGTAATGGTCGCATGTGA 1119 0.3771 MGFSSFVPCILMLVIQLAYAVMNVTSKLAIAGGMNPLILVAYRQIFGTVSIAPFAYWLERDMIPKMTKRIMIQIFLSSITGVTGNQVLYFVGLKFSTATIACALTNLLPAFTFILAILFRQENLRIKKKSGIAKVVGTVLCVGGAILLSFYHGQVIGIGKSSIHWGYAEKVQSGGDNSNASTSGSFLGPVLLILSALIWSAWFIIQADMSKNFPVPYTSTTYMCFLASFQCMFIALCFDHKASSWSLHDAMRVTSSVYSGVICTGLTYCIISWTIERKGPLYVSVYTPLQLILTAIISWAFMSEKLYVGTAIGSLLIIFGLYGVLWGKSQEVDNMKLEDATDQDEGIKNDDMEMQSYVMPSSNGNGNGNGRM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0335 372 PANTHER WAT1-RELATED PROTEIN 9 342 - -
Psa3g0335 372 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Psa3g0335 372 Pfam EamA-like transporter family 8 149 IPR000620 GO:0016020|GO:0016021
Psa3g0335 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 329 - -
Psa3g0335 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Psa3g0335 372 PANTHER WAT1-RELATED PROTEIN 9 342 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0335 Psa-Chr3 33267831 33270882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0335 1 367 Nodulin-like Gene Family AT1G09380 53.243 9.58e-141 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0335 - - gmx:100798142 506.138