Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0315 ATGGTTTCCGACAATCAATTTCGTAGGATTCCTAGTCATGGCTCCAAACGGAATCTTGGTCTTACAAAACAAGCATCAAACAGTGGCCTTAAATATGTGATTAACACTCTAAGGATGAATGCTAATGATTCCTTCCTCATGGAATCTTTCATTCGAGGGGTGGTAAGAGATGTGGTGGAAAGAAAAGTCCAAGAGCGTGTTTTTTCAAGAGAAAAAACTAATGAAGTCAATAGTCAACGAGGGTCCTTTTTCTTCAATGAAGATAGAGATTTGTCCCATCCAGGATGGGCAAGAAAGAAAAAGTTCAGTTTAGGAGCAAAAGCTATGAAAAATGGAGAGAATATTAAGGAAGGTAGAAGTCGAGCTTTTAGGGTCAAAGATGTCAGAGGAGAAGCTTACAAGAAACACTATCCTCCATTGTTGATGGATGAGGTGTGGCGTTTGGAGAAAATTGCTGAAAATGGAAAATTCCGCGACAGACTCAATAGCAACGGAGTTCATACTGTGAAGGATCTGTTGAGGTTACTCATAATCAATGAATCTTCATTGCATAAGAAATTTGGCAAAATTCAGAAGAAATGTTGGTCAGCGATTATCGAACATGCCCGGTCGTGTGTTGTAGATGAGTACATGCTTTACAGCTATGAGATAATTGGAGAACCAATAATGCTGTTGTTCAATGTCATCTATGAACTTGTTGGTGTCACATTTGATAAACAAAAGTTTTATTTACCAGATGATCCACATTCACACCTAGCCAGAAGAATTGGGTAG 774 0.3876 MVSDNQFRRIPSHGSKRNLGLTKQASNSGLKYVINTLRMNANDSFLMESFIRGVVRDVVERKVQERVFSREKTNEVNSQRGSFFFNEDRDLSHPGWARKKKFSLGAKAMKNGENIKEGRSRAFRVKDVRGEAYKKHYPPLLMDEVWRLEKIAENGKFRDRLNSNGVHTVKDLLRLLIINESSLHKKFGKIQKKCWSAIIEHARSCVVDEYMLYSYEIIGEPIMLLFNVIYELVGVTFDKQKFYLPDDPHSHLARRIG* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0315 257 Pfam Calmodulin binding protein C-terminal domain 212 246 IPR046829 -
Psa3g0315 257 Pfam Calmodulin binding protein central domain 141 205 IPR046830 -
Psa3g0315 257 MobiDBLite consensus disorder prediction 1 22 - -
Psa3g0315 257 PANTHER OS02G0177800 PROTEIN 96 247 IPR012416 GO:0005516
Psa3g0315 257 PANTHER OS02G0177800 PROTEIN 20 79 IPR012416 GO:0005516
Psa3g0315 257 PANTHER CALMODULIN-BINDING PROTEIN 20 79 - -
Psa3g0315 257 PANTHER CALMODULIN-BINDING PROTEIN 96 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0315 Psa-Chr3 31170406 31172086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0315 96 248 Calmodulin-binding Proteins AT5G26920 45.455 2.26e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0315 - - mtr:MTR_7g112000 214.542