Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0314 ATGGTATCAGATAATCATTTTCCAAGGATTCCTAGTCATGGCTCTAAAGGGAATCTTGGTGTTACAAAACAAGCATCAAATAGTGGCCTTAAAAAAATGATGAACACTCTAAGGATGCATGGTCACGATTCCCTCATGGAATCTTTCTTTCGAAGAGTGGTAAGAGATGAGGTCAAAAGAAAACTCCAAGAGCACTTATTTTCAAGAGAAAAGATTAATGAAGGTGGAAAATCTGGAGCTAGATCCTTAGAGTTGTGTTTTATTAATAATAATAAGTTGCCAGATACGACTTTTACTAAAACTAATGTAATTCCAAAAGATGAACCACTTCAAGTTGCACTATTTGATGTTAGATCTAAGTCAATAGTCAACGAGGGTCCTTTTTCTTCAATGAAGATAGAGATTTGTCCCATCCAGGGTGAGTTTGAATCCTGTGAGGATGATGATTGGAGTGAAACTGAATTCAATGATAATATCTTGCATGAAAGAGAGAATAAAGAACCATTGTTGGTTGGAGATAGGGTTGTTACTCTTAAAAATGGAGTTGGTTCTATTTCTAAAATCATGTTCAATGATAATTCTGGATGGGTGAGAAACAAAAAGTTCAGGTTGGGAGCAAAAGCTATGAGAAATGGAGAGAATATTAAGGAAGGTAGAAGTCAAGCTTTTAGGGTCAAGGATATCAGAGGAGAATCTTACAAGAAACACTATCCTCCATTGTTGATGGATGATGTGTGGCGTTTGGAGAAAATTGCTGAAAATGGAAAATTCCGTGAACGACTTAATAGCAACGGAATTTATACCGTTAAGGATCTGTTGAGGTTACTCGTAATCAATGAATCTTCATTACATGAGAAATTTGGCAAAATTCAGAAGAAATGTTGGTCAGCGATTATCGAACATGCCCGGTCGTGTGTTTTAGATGAGTACATGCTTTACAGCTATGAGATAATTGGAGAACCAATAATGCTGTTGTTCAATGTCATCTATGAACTTGTTGGTGTCACATTTGATAAACAAAAGTTTTATTTACCAGATGATCTCACAATTTCCACACCTAGCCAGAAGAATTGGGTAGAAATTGTGAAGCAAGACGCATACAAAAACATTGAAAATTTAAAAGCAATTGATGAGGGTCTATTGAACTGCATAAGCTTAGAAGCACGTATAAAATCAACACAAGAACAAGATCTGCAACATATAGATATCTCTGCAGCAAATGTTAATGATGATGGGATGCAAAATGTTGAAATCAATGTTGATCCGGTGGCAGACATAAGAGGAATACCAGAAAACAGTTATGGTCATTCAACATATACAATTTCTGAGCCAGATTATGATGTTTCATTTGATAATTTTGATGAAGCTGAGTTTAGCACTTTTGTTGATTTACTGAATTTTGATATGGATGTATCAAACATTGAGAAACCAAAAGCAGTGTGGTGTAAGATTCGTGCTGTTGTGAAATGGGGAATATCAGTGAGAAGAGTTGTAGCTGCCAAGAGGAATGAACCTTTGTCTTTTTATAAGGTTTATGATATCAGTGCTATTTTCTAA 1557 0.3552 MVSDNHFPRIPSHGSKGNLGVTKQASNSGLKKMMNTLRMHGHDSLMESFFRRVVRDEVKRKLQEHLFSREKINEGGKSGARSLELCFINNNKLPDTTFTKTNVIPKDEPLQVALFDVRSKSIVNEGPFSSMKIEICPIQGEFESCEDDDWSETEFNDNILHERENKEPLLVGDRVVTLKNGVGSISKIMFNDNSGWVRNKKFRLGAKAMRNGENIKEGRSQAFRVKDIRGESYKKHYPPLLMDDVWRLEKIAENGKFRERLNSNGIYTVKDLLRLLVINESSLHEKFGKIQKKCWSAIIEHARSCVLDEYMLYSYEIIGEPIMLLFNVIYELVGVTFDKQKFYLPDDLTISTPSQKNWVEIVKQDAYKNIENLKAIDEGLLNCISLEARIKSTQEQDLQHIDISAANVNDDGMQNVEINVDPVADIRGIPENSYGHSTYTISEPDYDVSFDNFDEAEFSTFVDLLNFDMDVSNIEKPKAVWCKIRAVVKWGISVRRVVAAKRNEPLSFYKVYDISAIF* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0314 518 Pfam Calmodulin binding protein-like N-terminal domain 83 227 IPR046831 -
Psa3g0314 518 Pfam Calmodulin binding protein central domain 241 305 IPR046830 -
Psa3g0314 518 Pfam Calmodulin binding protein C-terminal domain 312 374 IPR046829 -
Psa3g0314 518 MobiDBLite consensus disorder prediction 1 23 - -
Psa3g0314 518 PANTHER OS02G0177800 PROTEIN 21 502 IPR012416 GO:0005516
Psa3g0314 518 PANTHER CALMODULIN-BINDING PROTEIN 21 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0314 Psa-Chr3 31074188 31076869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0314 46 378 Calmodulin-binding Proteins AT5G26920 41.765 5.90e-79 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0314 - - mtr:MTR_7g112000 524.628