Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0309 ATGCCTACTGCAACCTTCGACCTAGGAGCCGTTCCCTTCAACCCCGACGGATGGGGCCCACTCGAATCCACCGCCGATGACACCAACGTCCCCTTCGCTCCATTCTCCCGTTCCGATAAGCTAGGCCGGATCGCCGATTGGACTCGCAACTTCAACAACCCGACCCGATCCAAAAACCCAGCCGACTCCGCCTTCGACTTCACCTCCGACGCTTCATTCCCTTCCTTTGCCGACGATGACTCATCTTTCCGATTAGTCGACGGTAAGCCTCCACCGCGTCCCAAATTCGGACCAAAATGGCGCTTCCAGCGTCAGCTTCAGCTTCCTCAGCGCCGCGACGAGGAAGTCGAAGCTAAGAAGCGTGAAGCTGAGAAAGAAAGAGCTCGTCGCGATCGACATTATCAGAATCGTTCAAACCCTAGCAACCATCGCCGTGAGCTTTTTAAGTCATCGGTTGATATTCAACCGGAATGGAATATGCACGACCAGATCCCTTTCTCCACTTTCACCAAACTATCATTCACCGTCTCTGAGCCTGAGGATCTCCTCCTCTGCGGCGCGGTCGAGAGTTACGATCGGACTCATGATCGAATCGCTCCGAAAAATGAACGTCGTCTTGAGAGGTTCAAGAATCGTAACTTCTTCAAAGTTACCACCACTGATGATCCTGTTATCCGGAGGCTCGCGAATGAAGATAAAGCCACGGTTTTCGCTACTGATGCTATTTTGTCTACTCTCATGTGCGCTCCTAGGTCTGTTTACTCCTGGGATATTGTTGTTCAGCGAGTTGGGAATAAGCTTTTCTTTGATAAGCGCGATGGGTCGCAGTTGGATTTGCTTTCTGTTCATGAGACCTCTCAGGAGCCATTGCCTGAGGCGAAAGATGATATTAACTCGGCTCATTCGCTTAGTGTGGAGGCTTCTTATATCAATCAGAATTTCTCTCAGCAAGTTTTGATTAGGGATGGGAAAAAGGTTACTTTTGATGAGCCTAATCCTTTTGCTAATGAAGGTGAAGAGGTTGCTTCTGTTGGTTATAGGTATAGAAGGTGGAAGCTTGATAATGATATGTATCTTGTTGCTAGGTGTGAGGTGCATAGTGTTGTTGATGTCAATAACCAGAGGTCTTTCCTTACTTTGAATGCATTGAATGAGTTTGATCCGAAGTATTCTGGTGTTGATTGGAGGCAGAAGTTGGAGACACAAAGAGGTGCTGTTTTGGCTACTGAACTCAAGAACAATGCTAACAAGTTGGCTAAGTGGACTGCACAGGCTCTTTTGGCGAGTGCTGATATGATGAAGTTGGGATATGTTTCTCGGATTCATCCCCGTGATCATTTTAACCATGTGATATTGGCTGTTGTTGGATATAAACCCAAGGATTTTGCTGCACAGATTAATTTGAATCCGACCAATATGTGGGGAATTGTGAAGTCTATCGTGGACTTGTGCATGAAATTGAATGAGGGGAAATATGTTCTCGTGAAGGATCCATCTAAGCCCCAGGTTAGGATTTATGAGGTTCCAGCGGATGCATTTGAGAATGACTATGTGGAGGAGCCAATACCTGAAGAGGAGCAAGTTCAACCACATGCAGATGGTGCTGATGATGCTGATGGCGTAGAGGCAGCTGCGGCTAGTACCAATGATGGGGAAGATAAGAAGGTTGAAGATCAAGCTTAA 1683 0.4724 MPTATFDLGAVPFNPDGWGPLESTADDTNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADSAFDFTSDASFPSFADDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEAKKREAEKERARRDRHYQNRSNPSNHRRELFKSSVDIQPEWNMHDQIPFSTFTKLSFTVSEPEDLLLCGAVESYDRTHDRIAPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEASYINQNFSQQVLIRDGKKVTFDEPNPFANEGEEVASVGYRYRRWKLDNDMYLVARCEVHSVVDVNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPKDFAAQINLNPTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPIPEEEQVQPHADGADDADGVEAAAASTNDGEDKKVEDQA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0309 560 MobiDBLite consensus disorder prediction 516 560 - -
Psa3g0309 560 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 5 541 - -
Psa3g0309 560 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 4 519 IPR007783 GO:0003743|GO:0005737|GO:0005852
Psa3g0309 560 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 507 IPR007783 GO:0003743|GO:0005737|GO:0005852
Psa3g0309 560 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 5 541 IPR007783 GO:0003743|GO:0005737|GO:0005852
Psa3g0309 560 MobiDBLite consensus disorder prediction 106 147 - -
Psa3g0309 560 MobiDBLite consensus disorder prediction 524 538 - -
Psa3g0309 560 Coils Coil 111 136 - -
Psa3g0309 560 MobiDBLite consensus disorder prediction 89 147 - -
Psa3g0309 560 PIRSF Transl_init_eIF3d 1 537 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0309 Psa-Chr3 31005032 31009786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0309 1 558 Eukaryotic Initiation Factors Gene Family AT4G20980 74.619 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0309 K03251 - gmx:100799613 920.228