Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0305 ATGGAGAAAAAACGTTCCAAGGGAAGTTTCCTTAGCTTGTTTGATTGGAATGCCAAATCTCGGAAGAAGCTCGTTTGGAATAATCCAACTTTACCTGAGGTTTCAAAGCAGGGAAAGGAAAATCTAGAGAATTTGCCAGACTCGCAGTTCTATAGGATAAAGGGGGATGAGAATGGAGCAAGTCCGAGTGATATTGCAAGTGGTGATTTTAACTGCGCCGTATCAGGTTGTAGTGATGAAGGGTGTGGTAGTAAAGCCCCTGGGTTAGTAGCAAGACTCATGGGTTTGGATTCGTTGCCGACTTCAGAAGTTGATGACTTCCGTCGCGCTGACTACTTAAACACACCATTTAAGCCAGAGAAATCTTCTTGGGACGCCATGGAATCAAAGGCACGTAAAATGGAAAACCGGCCAATGAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAGATTATTGTCTCCTATCAAGAGTAATGGTTTTCTGCCGCCGAAAAGTGCAGCTCACATAATGGAGGCAGCTGCTAAAATAATTGATGGAAGCCCTCAGCCGTATATGAGGAATAGAATGCTATCGTCCGGGTCTTCATCTGTTCCGCTAAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAATATGCTCCCATGCCTAGAAAGCAAGCGGATTCGAACAATACCAACCGTTCAAACTGCAAGCCTAGTGAGAAGAGCTCTAAGAGTTCAAGAGATTATGATAAACGGAGCTCTAAAGGAAAATCAGGTTCTCTTGCAATGCCATCCAAAAACAATGTTCAAAGCCGAGATACATTGGTTTCAAATGGAAATAGGAAATATACGAGGCAGAAAGAACAAAATGATATAAAATCAAACCAGCCCACAAGGAGCCAGAAACCAATTATAAACCGAGCATTGCCGCAGAAAACGAATGCAAGCCGTAACAGCAATGTGCTGATTCAGAATAATCAAAAGCAAAACGGCATGATTTCCAAAGGTAAATCAGCCTCAAAAATAGATTCAAACAAGCCAACAGCGCGAGGTTCTTCTTCTGAAAGTTCTACCGGGATCAGGAAGGCAACAAACAAGAGTGCTACGAATGTCAATATTCCGCCTAAAAGGTCAGGCTCTAGGGCAACTGATAACCGAAAGGAGTTTCCTCCATCCAAAACACAAAGTATTTCCCAAAAGAAAAAGTATAACAGCAGAGGTTTTCACGAGGCAAGAAGTCCCGATCATGCAAAAAGTGATTTCGAAAGCAAGTCCATAAAATGCAATTATACGACTGATGGAAGTATTGATCAGAATGCATTTAACTTGAACGAAAGCAGTGATGTCATTTCATTTACATTTACATCTCCCTTGAGGAAAAGCATGCCGGAGTCACTATCCTCTGACCAGGTGACGGAAACCAGAACTAGATTTGGTGTCGACTCTCTCGGGCACAATGATAATCTTCATCCCAAAAAATTATCACTATCTCCGACACATATGATAGATAGTGATGCATTGAGTGTTCTGTTGGAGCAAAAGCTTCAAGAATTAACATCGAGACTTAACTTACCTCAATGTACCCTAGCCTCGGAGGAGCCATCTACTGATTTGAGATCTAGTTTGCAAGATAAAGCATCCAGTATCGTAAACACCACAGATATGGAACAAGATGAAATGTTCAGTGATGAACTTGATAGAATGCATAACTATCGATATTATTCAAGTGACGAGCTAGTGCTTAACACGAATCAGCAACTGCAGACATTGGAAGTAAGGGAAGATCCTAGCTATAGCAGCAACAATGAAAGTGGAAATGATCTTGATTGTCAGCATTCCAATGCTGATACAAACTTTCAAGGTCCTTCTGTCAGTGAAAGTTACATGGATAGTGAAGACAGTACCTATGGCAGCACGGTTTATTCATCCATGCAAGATGAGGAAGTATCTAACATTTCCCAGATAAACGGATCTGAATCACTTGAAAATGAAGCGACGTCGTCAGAGCAAAGCTCTTCCGTATCTACTGCGCGCAACATGTCTGTCACACAAATAATCAGATCACCGAACATGGTAGATTTTAAAAGATCAGGCATTATGGAACTTGACTATGTACAAAACATACTCGGCAATGCAGAGTTCATGGCAGAAGAATTCATCATGGGTCGAACTAACACAGTCATAATGCCAAATCTCTTCGATCTGTTGGAGAATCACAGTACCGGAACAACAACATACTGCGGAGAAGAGTACTCTAAGCTTGACAGGAAGGTTTTATTCGACTACGTGAGTGAGTGCTTAGAGTCGAGATGCGAGCAAGCTTTTGTTGGAAGTTGCAAATCATGGCCTAGATGGGTGACATCGATTCAGAGGAAGAACATCTTAGCAGAAGAATTGTACAAAGAGATGTTGAGTTTTAGGAACATGGAAGATGTTATGGCGGAAGAACTTCTGAGCAATGACATGAGTAGAGGATATGGGAAATGGCTTGACTTTGACATTGAAGCATTTGAAGAAGGGTTAGAGGTTGAAGAGGACATAGTAGAATCTTTGATTGATGAATTGCTTTCTGATTTGTTGGTTGTATAA 2607 0.4131 MEKKRSKGSFLSLFDWNAKSRKKLVWNNPTLPEVSKQGKENLENLPDSQFYRIKGDENGASPSDIASGDFNCAVSGCSDEGCGSKAPGLVARLMGLDSLPTSEVDDFRRADYLNTPFKPEKSSWDAMESKARKMENRPMKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGFLPPKSAAHIMEAAAKIIDGSPQPYMRNRMLSSGSSSVPLRILDLKERLEAAQYAPMPRKQADSNNTNRSNCKPSEKSSKSSRDYDKRSSKGKSGSLAMPSKNNVQSRDTLVSNGNRKYTRQKEQNDIKSNQPTRSQKPIINRALPQKTNASRNSNVLIQNNQKQNGMISKGKSASKIDSNKPTARGSSSESSTGIRKATNKSATNVNIPPKRSGSRATDNRKEFPPSKTQSISQKKKYNSRGFHEARSPDHAKSDFESKSIKCNYTTDGSIDQNAFNLNESSDVISFTFTSPLRKSMPESLSSDQVTETRTRFGVDSLGHNDNLHPKKLSLSPTHMIDSDALSVLLEQKLQELTSRLNLPQCTLASEEPSTDLRSSLQDKASSIVNTTDMEQDEMFSDELDRMHNYRYYSSDELVLNTNQQLQTLEVREDPSYSSNNESGNDLDCQHSNADTNFQGPSVSESYMDSEDSTYGSTVYSSMQDEEVSNISQINGSESLENEATSSEQSSSVSTARNMSVTQIIRSPNMVDFKRSGIMELDYVQNILGNAEFMAEEFIMGRTNTVIMPNLFDLLENHSTGTTTYCGEEYSKLDRKVLFDYVSECLESRCEQAFVGSCKSWPRWVTSIQRKNILAEELYKEMLSFRNMEDVMAEELLSNDMSRGYGKWLDFDIEAFEEGLEVEEDIVESLIDELLSDLLVV* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0305 868 MobiDBLite consensus disorder prediction 409 427 - -
Psa3g0305 868 PANTHER DUF4378 DOMAIN PROTEIN 104 868 - -
Psa3g0305 868 PANTHER DUF4378 DOMAIN PROTEIN 1 104 - -
Psa3g0305 868 MobiDBLite consensus disorder prediction 229 245 - -
Psa3g0305 868 Pfam Domain of unknown function (DUF4378) 707 860 IPR025486 -
Psa3g0305 868 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 104 - -
Psa3g0305 868 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 104 868 - -
Psa3g0305 868 MobiDBLite consensus disorder prediction 296 385 - -
Psa3g0305 868 MobiDBLite consensus disorder prediction 264 289 - -
Psa3g0305 868 MobiDBLite consensus disorder prediction 223 427 - -
Psa3g0305 868 MobiDBLite consensus disorder prediction 246 261 - -
Psa3g0305 868 Pfam DUF761-associated sequence motif 78 104 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0305 Psa-Chr3 30455296 30459133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0305 1 866 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.394 9.99e-104 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0305 - - gmx:102663635 1017.3