Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0291 ATGGGAGACACTGGTAAAAATAAGAGAATCGCCATCATTGGCGTGTCTACCTTCTTATTAGTAGCTATGGTTGTGGCGGCCGCGGTTAGCGTTGGTCTCAGCAAAAAAGAAGCAGTTGAAGAGACAAAAGATTCACATCTATCTTCATCCATGAAAGCTGTTAAAAGTCTTTGTGCACCGACGGATTACAGAGAAGAATGCGAGGAAAGTCTCACATCACAAGCTGGAAACATAACTGATCCAAGAGAGCTCATCAAAATCGCCTTCAATGTAACCATCACGAAAATTGGCCAAGAGCTTGAAAAAACTCAACTCCTTAAAGATGTTGAAAAGGATCCAAGAACAAGTGATGCATATGACACATGTAAAGAGCTCATGAAGCTTTCCATTGAGGAATTCACAAGGTCATTGGACAGGTTTAGCCGATTTGACCTTAATAACATCGATAGAATCCTCGCGAGTCTTAAGGTTTGGTTGAGTGGTGCAATAACATACCAAGAAACATGTTTGGATGCTTTTGAGAACACTACCGGTGATGCTGGTCAGAAAATGCAGGAGATGTTGAAAGCATCTATGCATATGAGTAGTAATGGTCTTTCCATAATCAACGAACTTTCCAAAGCCTTAACAAACCTGAAACCTCCTACTCGTCGTCTTTTGGATGAATCTGAAATTGATCCAGAAGTTATTGGTAATGGTGATTTTGAGCTCCCTGAATGGGTTGAAGATCGCGTTGGAGTTAGGAAACTACTTAAAATGACCGGAAGAAAACTTAACGCTCAGCTTGTTGTTGCTAAGGATGGAAGTGGAAACTGTACCACAATCAATGAAGCTCTTCGCTTTGTTCCTAAAAAGAACTTGAGGCCTTATGTTATTTACATTAAGGAAGGTGTTTATAGCGAATACGTTGAAGTTCCTAGAAACTTAACTCATGTCGTTTTCCTTGGTGATGGTGCTAAAAAAACCCGCATTACTGGTAACAAGAACTTCGTTGATGGCATTGGTACCTTCAGAACCGCAACCGTTGCTGTTCTTGGAGATTTCTTTGTTGCACTTGGTATCGGTTTCGAAAACACTGCAGGAGCAATAAAGCATCAAGCAGTTGCATTGAGAGTCCAATCAGACAGATCAATCTTCTACAAGTGTAGAATGGACGGTTACCAAGACACACTTTACGCTCACACCATGCGTCAATTCTACCGCGACTGCATCATCTCTGGTACCATAGACTTTGTCTTTGGCGATGCCGTTGCTGTTCTACAAAACTGCACATTCGTAGTCCGAAGGCCAATGGAAAACCAACAATGTATTGTGACAGCACAAGGCAGGAAGGAGAAAACACAGCCATCAGGATTGGTCATTCAAGGAGGCTCCATTGTGTCAGACCCTGGTTACTATCCAGTTAGGTTTGACAACAAAGCTTACCTTGCTCGTCCATGGAAGAATTTCTCAAGAACTATCTTCATGGATACATACATCGGTGACTTGATTACACCTGATGGTTATATGCCATGGCAAACACTTCAAGGAGTAACAGGAACTGAAACATGTTTCTATGCTGAGTACAATAACCGCGGTCCTGGTTCTGATATTTCAAAGCGTGTCAAATGGACAGGTGTTAAAACCATTACATCGGAAGGAGTGACTGGTTTCTTGCCATCAAAGTTTTTCCTCGGAGATGACTGGATTAGAGTTACCAGCATTCCTTATTATCCAGGAGGAACTACGGGTTCTTCTAGAGTCCCAACTCATTAA 1755 0.4194 MGDTGKNKRIAIIGVSTFLLVAMVVAAAVSVGLSKKEAVEETKDSHLSSSMKAVKSLCAPTDYREECEESLTSQAGNITDPRELIKIAFNVTITKIGQELEKTQLLKDVEKDPRTSDAYDTCKELMKLSIEEFTRSLDRFSRFDLNNIDRILASLKVWLSGAITYQETCLDAFENTTGDAGQKMQEMLKASMHMSSNGLSIINELSKALTNLKPPTRRLLDESEIDPEVIGNGDFELPEWVEDRVGVRKLLKMTGRKLNAQLVVAKDGSGNCTTINEALRFVPKKNLRPYVIYIKEGVYSEYVEVPRNLTHVVFLGDGAKKTRITGNKNFVDGIGTFRTATVAVLGDFFVALGIGFENTAGAIKHQAVALRVQSDRSIFYKCRMDGYQDTLYAHTMRQFYRDCIISGTIDFVFGDAVAVLQNCTFVVRRPMENQQCIVTAQGRKEKTQPSGLVIQGGSIVSDPGYYPVRFDNKAYLARPWKNFSRTIFMDTYIGDLITPDGYMPWQTLQGVTGTETCFYAEYNNRGPGSDISKRVKWTGVKTITSEGVTGFLPSKFFLGDDWIRVTSIPYYPGGTTGSSRVPTH* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0291 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 207 IPR035513 -
Psa3g0291 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 205 IPR006501 GO:0004857
Psa3g0291 584 PANTHER PECTINESTERASE 10 576 - -
Psa3g0291 584 Gene3D - 255 574 IPR012334 -
Psa3g0291 584 SMART PMEI_2 49 201 IPR006501 GO:0004857
Psa3g0291 584 PANTHER PECTINESTERASE 10 576 - -
Psa3g0291 584 SUPERFAMILY Pectin lyase-like 259 572 IPR011050 -
Psa3g0291 584 CDD PMEI-like_3 56 207 - -
Psa3g0291 584 Pfam Pectinesterase 262 559 IPR000070 GO:0030599|GO:0042545
Psa3g0291 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 206 IPR035513 -
Psa3g0291 584 Pfam Plant invertase/pectin methylesterase inhibitor 53 201 IPR006501 GO:0004857
Psa3g0291 584 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0291 Psa-Chr3 29134466 29136802 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0291 3 583 Carbohydrate Esterase AT3G05610 47.611 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0291 K01051 - gmx:100801686 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0291 3 29134466 29136802 Psa3g0291 3 29134466 29136802 ECH