Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0289 ATGGCATTTCTTGTAAATTTCCTTTTCATTCTCGTCCTTTTTCCATCATTTGACAAGGTTCTCTCATTCCCAGATGAATTTCCCTCGGAAATGCAAACGCAAGACATGCAAGCTTTGATTGCACAAGCCTGCATGGATATTGAAAACCAAAACTCGTGCCTCACAAACATTCATAACGAGCTAACGAAAACTGGCCCTCCGAGTCCTACTTCGGTCATTAATGCTGCACTCAGAACCACGATCAATGAAGCCATAGGTGCGATCAACAACATGACAAAGATAAGTACTTTTTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTTCTTGATTTCTCTGTATCAGAGCTTGCTTGGTCATTAGGTGAGATGAGGAGAATTCGAGCGGGCGACAGAACCGCACAATACGAGGGAAACCTCGAAGCTTGGCTAAGCGCTGCGCTTAGCAACCAAGACACATGTATCGAAGGCTTCGAAGGCACTGATAGACGTCTTGAGAGTTACATTAGTGGAAGCTTAACGCAAGTAACACAGCTTATCAGTAATGTTCTGTCTTTATACACTCAGCTTAATCGCTTACCCTTTAGGCCTCCAAGGAACACTACCCTGCATGAAACAAGTACTGATGAAAGCTTGGAGTTTCCTGAATGGATGACCGAGGCTGATCAAGAGCTTCTTAAATCTAAACCTCGTGGGACAGTTGCAGATGCAGTTGTTGCGTTGGATGGGAGCGGTCACTACCGTACAATCAATGAGGCTCTTAATGCAGCTCCGAGTCATAGCAATAGGAGGCATGTTATATATGTAAAGAAGGGAATTTACAAGGAGAATGTTGATATGAAGAAGAAGATGACCAACATCATGATAGTTGGCGACGGTATTGGCCAAACCATTATCACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACGTTTGCTGTATCGGGGAAGGGTTTCATTGCGAAGGACATGACATTCCGGAACACAGCTGGACCAGTAAACCATCAAGCTGTGGCACTGCGTGTGGATTCAGACCAATCGGCATTCTTTAGGTGTAGCGTAGAAGGGCACCAAGACACACTTTACGCGCACTCGTTGAGACAATTCTACCGCGAATGCGAAATCTATGGAACCATAGACTTCATTTTTGGCAATGGAGCTGCTGTGCTACAAAACTGCAAGATATACACAAGAGTCCCACTTCCATTACAAAAGGTTACAATAACAGCTCAAGGTAGGAAAAGTCCTCATCAAAGCACAGGCTTTACGATCCAAGATAGCTATGTTTTGGCCTCACAACCAACATATTTAGGAAGGCCATGGAAACAATATTCCAGAACAGTTTACATCAACACATACATGAGTAGTATGGTTCAACCTCGAGGGTGGCTCGAGTGGCTTGGAAACTTTGCATTGGACACTCTCTGGTACGGCGAATACAGAAACTATGGTCCTGGTTCATCACTTGCAGGTAGGGTTAATTGGCCTGGTTATCATGTCATTAAAGACGCCTCTACCGCCGGTTTCTTTACGGTTAACCGCTTCCTTAACGGCGGTTCATGGTTGCCTAGAACAGGTATCAAGTTCACAGCAGGGTTGAGCAATTGA 1635 0.4471 MAFLVNFLFILVLFPSFDKVLSFPDEFPSEMQTQDMQALIAQACMDIENQNSCLTNIHNELTKTGPPSPTSVINAALRTTINEAIGAINNMTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLNRLPFRPPRNTTLHETSTDESLEFPEWMTEADQELLKSKPRGTVADAVVALDGSGHYRTINEALNAAPSHSNRRHVIYVKKGIYKENVDMKKKMTNIMIVGDGIGQTIITSNRNFMQGWTTFRTATFAVSGKGFIAKDMTFRNTAGPVNHQAVALRVDSDQSAFFRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLASQPTYLGRPWKQYSRTVYINTYMSSMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVNWPGYHVIKDASTAGFFTVNRFLNGGSWLPRTGIKFTAGLSN* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0289 544 CDD PMEI-like_4 53 195 - -
Psa3g0289 544 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 7 542 - -
Psa3g0289 544 Pfam Pectinesterase 240 527 IPR000070 GO:0030599|GO:0042545
Psa3g0289 544 PANTHER PECTINESTERASE 7 542 - -
Psa3g0289 544 SMART PMEI_2 35 190 IPR006501 GO:0004857
Psa3g0289 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 195 IPR035513 -
Psa3g0289 544 ProSitePatterns Pectinesterase signature 1. 265 284 IPR018040 -
Psa3g0289 544 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 194 IPR006501 GO:0004857
Psa3g0289 544 Gene3D - 236 542 IPR012334 -
Psa3g0289 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 194 IPR035513 -
Psa3g0289 544 SUPERFAMILY Pectin lyase-like 240 541 IPR011050 -
Psa3g0289 544 Pfam Plant invertase/pectin methylesterase inhibitor 39 190 IPR006501 GO:0004857
Psa3g0289 544 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0289 Psa-Chr3 29088507 29090507 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0289 35 544 Carbohydrate Esterase AT3G05620 64.491 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0289 K01051 - gmx:100810565 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0289 3 29088507 29090507 Psa3g0289 3 29088507 29090507 ECH