Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0267 ATGATGGCAACAATGGAAGGAATAATGGACAAAGCTGTAATAGATGATGTGATTAGAAGATTGTTAGAAGGAAAAGGAGGAAAACAAGTTCAGCTTTCTGAATCTGAGATTCGTCAACTTTGCATCAACGCTAGACAAATCTTTCTATCCCAACCTATTCTTCTTGATCTCCGTGCTCCTATCCGCATTTGCGGTGATATACATGGTCAGTACCAAGACTTATTGAGACTTTTTGAATACGGTGGTTTTCCTCCGTCTGCAAACTACTTGTTTCTCGGCGATTATGTTGACAGAGGGAAGCAAAGTTTGGAGACAATATGTTTGCTCTTGGCTTACAAAATAAGATATCCAGACAAAATTTATCTGTTAAGAGGAAACCACGAAGATGCAAAGATAAACCGAATATATGGTTTTTACGACGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTCACCGACTGTTTTAACTGTTTGCCGGTAGCTGCACTCATTGACGACAAAATACTTTGTATGCACGGAGGACTGTCTCCTGAGTTACAAAGTTTAGGTCAGATAAGAGAGGTTGTGAGGCCGACCGAAATTCCTGATAATGGTCTCTTGTGTGATCTCCTTTGGTCTGATCCTGATTCTACTGTTGAAGGTTGGCATGATAGTGACCGAGGCGTTTCGTGTACTTTTGGACCTGATGTTGTCGCGGATTTTTTGGATAAAAATGATCTTGATCTTATCTGCAGGGGTCATCAGGTTGTTGAGGATGGATACGAGTTTTTCGCTAAACGGAGATTAGTCACAATATTCTCTGCTCCAAATTATGGCGGGGAGTTTGACAACGCCGGTGCATTATTGTCCGTTGATGAATCTCTTATACTGAAACCCGCTGATAAAGATATAGGAACAGGAACAAGTTCATCAAAAATGAATTTTAAGAAGCCCCCAACATTGGGATAG 957 0.4054 MMATMEGIMDKAVIDDVIRRLLEGKGGKQVQLSESEIRQLCINARQIFLSQPILLDLRAPIRICGDIHGQYQDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPELQSLGQIREVVRPTEIPDNGLLCDLLWSDPDSTVEGWHDSDRGVSCTFGPDVVADFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLILKPADKDIGTGTSSSKMNFKKPPTLG* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0267 318 Pfam Calcineurin-like phosphoesterase 61 252 IPR004843 GO:0016787
Psa3g0267 318 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 1 297 - -
Psa3g0267 318 SMART pp2a_7 32 302 IPR006186 GO:0016787
Psa3g0267 318 Pfam Serine-threonine protein phosphatase N-terminal domain 14 58 IPR031675 -
Psa3g0267 318 ProSitePatterns Serine/threonine specific protein phosphatases signature. 123 128 IPR006186 GO:0016787
Psa3g0267 318 SUPERFAMILY Metallo-dependent phosphatases 8 291 IPR029052 -
Psa3g0267 318 Gene3D - 5 306 IPR029052 -
Psa3g0267 318 PRINTS Serine/threonine phosphatase family signature 60 87 IPR006186 GO:0016787
Psa3g0267 318 PRINTS Serine/threonine phosphatase family signature 89 116 IPR006186 GO:0016787
Psa3g0267 318 PRINTS Serine/threonine phosphatase family signature 122 146 IPR006186 GO:0016787
Psa3g0267 318 PRINTS Serine/threonine phosphatase family signature 156 182 IPR006186 GO:0016787
Psa3g0267 318 PRINTS Serine/threonine phosphatase family signature 185 212 IPR006186 GO:0016787
Psa3g0267 318 PRINTS Serine/threonine phosphatase family signature 242 262 IPR006186 GO:0016787
Psa3g0267 318 PRINTS Serine/threonine phosphatase family signature 264 280 IPR006186 GO:0016787
Psa3g0267 318 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0267 Psa-Chr3 27217073 27219231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0267 55 245 Calmodulin-binding Proteins AT5G63870 34.513 5.85e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0267 K06269 - gmx:100805030 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0267 3 27217073 27219231 Psa3g0267 3 27217073 27219231 ECH