Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0244 ATGATCATCACAATGCCTTCAAAAAAAACCTCCTCACTCTCCCTCCTCCTCATTCTCATTCTCATTTTCTTTTTCTTCACAACAAACTCCCCTCCCTCTCCACCCCTCTCCATCACACGTAGATCACTCCTCACATCATCGTGCTCCTCCACCAACCCTAACTCCAACGGAATCATCAACTACCACTGCATTTTCCCCCAAACTCCATTCCTCTCCATCGCATCTCTCTCCATCCTCCTCATCCTCCATTTCTACATCCTCATCAAAACCGCACAACACCATTTCTCAATCCTAACCACCAAACTCGCCTCTCATCTCAATCTCTCCCCTAGCATGGCCGCCGTCACGTTACTCGCTCTCGGTAACGGCTCTCCCGACGTTTTCTCGTCTCTCGCCGCTCTTCGCGCCGGTCAGTATCGTACCGGCTTCGGCGCGATACTATCCGCCGGAGCTTTTGTTTCTGCTCTCGTTGTAGGTTTTGTCGCGATCTACGCGGCTCCGTTTCCCGTCGATCCGGCGCCGTTTGTTAGAGATGTTTTGTTTTACTTAACCGCTGCTATGTTTCTGTTTTACGTTTATCTTAGTGCGGAGATTTTTCTTTGGCAAGCCGTTGGATTCGTTGCGTTCTATCTCTTCTTTGTTGGTTTTGTGTTTTACATGGATTTAGGAATCGTGAATCGGAGGGAAAAGAGTTCTGCGGATCTTGAGGGACAGGTTGAATCGTATTACGATGAGAAATCGCTGGGATCTGGAGAAAAAGAGAAGCACGCTTCTGGATTGAGTGGATCTTTTCGATTGATTTCTAAAGCATGGGAGCTTCCTGTCTTGACTCTTTTAAGATTGACAATCCCTCAACCAGCACCATCACAATGGAGCAGATTTTATGCATCAGCCAATATTGCTCTTTGTCCACTAGCCCTCTTGTATGCATGCAACTCATTCATGCCACTGAATCATCCCATAGTCTTCCTCCTCCCTAATACTCTTTTTCCTCTCTGGTCCGTAGTGCTCATGACAAGCTTCTCTCTTGCGTTTCTTCATTTTGTGTTGGAAAAAGAACCCCCCAAAACAGAACATTTGCCTGTGGTGGTTGTGGCATTTGTTATGAGTGTGTTTTGGATATCTACCACTGCTGGAGAGCTGGTGAATTGCCTCGAAGCTTTAGGCACACTTCTCAAACTGTCACCAGCATTCCTTGGTCTTACAGTGCTAGCATGGGGAAATTCGGTCGGGGATCTTGTTGCCGATGTTGCAGTTGCTAAAGCTGGTCATCCAGCAATGGCAATGGCAGGATGCTTTGCTGGACCGATGTTTAACATGCTTGTTGGTCTTGGAACTGCTTTGGTCATACAAACGACAAATATATACCCTAAAGCCTATGAACTTAATTTCCATGTGGGTATAGTGATTGCATTTGTGTTCTTGCTATTAAGCCTCATGGGGTCTCTTTTGGTAATCACTTGGTCTCGATTCCGAGTGCCTAGGTTTTGGGGATTCTGTCTCGTGGGCCTCTATATTGCTTTTATGGCGTTGAGTATGGTAGTAGCCATTTTTTCAAGTTGA 1563 0.4632 MIITMPSKKTSSLSLLLILILIFFFFTTNSPPSPPLSITRRSLLTSSCSSTNPNSNGIINYHCIFPQTPFLSIASLSILLILHFYILIKTAQHHFSILTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGIVNRREKSSADLEGQVESYYDEKSLGSGEKEKHASGLSGSFRLISKAWELPVLTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMPLNHPIVFLLPNTLFPLWSVVLMTSFSLAFLHFVLEKEPPKTEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKLSPAFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTTNIYPKAYELNFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGFCLVGLYIAFMALSMVVAIFSS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0244 520 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 52 232 - -
Psa3g0244 520 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 264 519 - -
Psa3g0244 520 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 52 232 - -
Psa3g0244 520 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 264 519 - -
Psa3g0244 520 Pfam Sodium/calcium exchanger protein 77 218 IPR004837 GO:0016021|GO:0055085
Psa3g0244 520 Pfam Sodium/calcium exchanger protein 363 513 IPR004837 GO:0016021|GO:0055085
Psa3g0244 520 Gene3D - 108 233 IPR044880 -
Psa3g0244 520 Gene3D - 296 515 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0244 Psa-Chr3 25384030 25389472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0244 2 520 Antiporters AT1G08960 68.073 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0244 K13754 - gmx:100775437 787.334