Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0214 ATGGAGTGCAACAAGGATGAGGCTCTGAGGGCAAAAGAAATAGCTGAGAATAGATTGCAGACTGGTGACTTTGCAGGGGCACTGAAGTTTGCTATGAAAGCTCGGCGACTGTTTCCTGATACCCAGAACATCACTCAGATTATTACTATTTGTGAGGTTCACTGCGCTGCACAGAACAAACTCTCTACGTCTGATATGGACTGGTATGGAATTCTTCTAACTGAAAAATTTACTGAAGAAGCAACGATAAAGAAACAGTATAGAAAACTTGCGCTGCTACTTCATCCGGATAAAAATAAATCTGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCTAACAGAATATTGAGTGACCCAGCAAAGCGTTCTTTATATAACATGAAGTTCCATACTCAAAGTTCAAATTTGAATCAGAAGGAGACATTTTGGACATCATGCCAACATTGTAATACTAAGTACGAGTACTACAAAAACATTATAAATGCTACCTTGCATTGTCGACAATGTTTTAAACTCTTCAAAGCCTGCGATATCGGGTCGCCGGTTGCACCGCCAGGACATACATCATCATTTTACAGACATAAAGATACTCCAAACCAAGTGCCACCAAAACAAGCATCACAAAGTAATGGTGGAAAACCTTATGGTAAAGGACCGGAGGACATGTTTGTGCCCCATCGTCCTGTATCAACAAAACGTGGGGCTGGAGACGGGGCTTCTTGTAAAGTTCAAAAGAGTAAAGATGGCCATGGGGCCTCTTGTAAGGTTCAAAAGAGTAAAGATGGCCATGGTACTGCAGGTGTGACGAAGACTGCTGCTGGAACTTCCAACCATGCTACATCTAAGGCCAAGCAATCACGAACCCAAACAAATGTTGGAAGTAAGAGAGCAAGGCAGTCAGCATCAGCAGATTCAGTTGATGGAAATGGCATGAAAGATAACAATGTTCAAGAAAATGATGTTGATCCTTCCGGACTTGACACAGGAGTCCATTCTAGGAAATCTTCCAGGAAAAAGCCACAACAAGATGAATCTTTTAAGACCACTAAAGTGGAGAAAAGAGAAGTGCCTCCTAATGGTGGGTTGTTCAATAAGACAAGTCCAACTAGTTTCACTGCTGATGTGGCTGGTGAGAATGGAGAGACGAGAAACAAAACAAATGGCCAACCTGAAAAAACAGATCTAAGGAAAAAGGTGAAAGTTGAGCAATTGAATCCAAAAAGAAAGGAGACATCCAATCCCAATATTATATTCTGTCCTGATCCAGAATTCAGTGATTTTGATAAGGTTAGGATAAAGGATTGTTTTGCTGCTGATCAATACTGGGCTATTTATGATGATACTGTTCATGCCAAGATTCTATGCTCGCATCAAGAAGGTGCACTCCCCTTTCAAACTGGAATATACTTGGCTGGAACCAATCCAAATCTAAAAGATGAGATGAATGGCATGATGCAGATTCGCCTATGCATGCGGAAGGAGAAACTTGGTTTCAGACATTGGGATATAGGATGGGCTTCTAAACCTGAAAAGAATGCAGAATATCAATTTGAATTTGTCGAAGTCCTTTCTGATTTTGATGAGAAAGATGGTGTTAAAGTTACTTATCTGAGCAAGGTGAAAGGGTTTGTTTGTCTCTTTCAGCAAACTGTGCAGAATGAAGTTGGATTATTTTGTGTTCCACCTAATGAGTTGTATAGGTTTTCACACCGAGTTCCTTCATTTATGATGTCTGGTGGTGAAAGGAAAGATGTTCCAAAAGGATCATTTGAACTTGACCCTGCTGGCTTGCCTAAGAGTGTTTTTCAGGTTCAAGTCGGCGATCCGGGTGATGTGATGGACGATGGAAGGTTAAACAATGGAGTCAGTTCTTGCCAGGAATCATCCAAGTGTAAAGTTGACCAGGCAAAGTGTAACGAGAGTATTCCCAAAGCAAAATTGCGAGAAAGTGGTGGTCCTGAAAGAGTTACACCTATCAATAAAAAACCGCCAATGTCAAAAGCAGAAAATATGGGCAATGGTCATACAAGTACTAGTCAACACATGGTCAGAGAACCCGATAAGAACACTAGCCACAGGGACTACAGTCAACCAGAGGGAAGTGAAGCTGTTGCAAGCCAGACCAACAAGAATTTCAAGTCACCACAGAAACCCAACAAGAGAAATTATCACGTGGAGACATCGACAGTTCGAAGGTCACCAAGAGATTTAAGCAAGAAAAATGATGCAGGAGGTGCTGGTGAATGTGCCACTAGCAAGTTGGCTGATAATCATTCCAACACTAACAATAATGTTAAGGAAACTCAGTCGGTGGAAAGCGGTCGTGCGTGCTTGAGAAAAGATTCCGGAGTTATGGGAGCACGTCATGACTTTAATAAGGAAAAATCTAGGGAGATGTTTCAGTGTGGTCAGATATGGGCAATATACGGTGATAGGGATAATATGCCTGATGTTTATGTTCAAATCAAGAAGATTGAATCCACCTCTAATTTTAGGTTGCATGTATCCGAACTTGAACCCTGCTCGCCACCTGAAGGTTTCAAGCGAGCAATATCCTGTGGATCCTTCAAAATAAAAAAAGCCAAACCTCAAATTCTTTCTCCCTCAGCATTCTCTCATCAACTAAAAGTTGAACCCAAGGAAAATAGTATATATGAAATTTACCCTAAAAAAGGTGAGATTTGGGCTTTATACAAGGACCAGAATTATGAACTTACTTCTTCAGACCAGGACAGAGGCAGAAGTGAATGTCATATAGTAGAAGTATTAGCAGATAGTGACAAGGGTATAGAAGTTGTTATTCTGTTGCGTTTTAGCGGATCTCAGCCAATTTTCAAAGCTCCCATTATGCGGCGATCTAAGACCGGTGTAATTGAAATATTAAGAGAAGAGGTTGGTAGATTTTCACATCAGGTTCCTGCTTTTCAACATAGTGGAGAAGACGATCTTCATCTCAGAGGGTGTTGGGTGGCCGATCCGTCTTCCATTCCTGGTGTTGCAGTATAG 3012 0.414 MECNKDEALRAKEIAENRLQTGDFAGALKFAMKARRLFPDTQNITQIITICEVHCAAQNKLSTSDMDWYGILLTEKFTEEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIVEANRILSDPAKRSLYNMKFHTQSSNLNQKETFWTSCQHCNTKYEYYKNIINATLHCRQCFKLFKACDIGSPVAPPGHTSSFYRHKDTPNQVPPKQASQSNGGKPYGKGPEDMFVPHRPVSTKRGAGDGASCKVQKSKDGHGASCKVQKSKDGHGTAGVTKTAAGTSNHATSKAKQSRTQTNVGSKRARQSASADSVDGNGMKDNNVQENDVDPSGLDTGVHSRKSSRKKPQQDESFKTTKVEKREVPPNGGLFNKTSPTSFTADVAGENGETRNKTNGQPEKTDLRKKVKVEQLNPKRKETSNPNIIFCPDPEFSDFDKVRIKDCFAADQYWAIYDDTVHAKILCSHQEGALPFQTGIYLAGTNPNLKDEMNGMMQIRLCMRKEKLGFRHWDIGWASKPEKNAEYQFEFVEVLSDFDEKDGVKVTYLSKVKGFVCLFQQTVQNEVGLFCVPPNELYRFSHRVPSFMMSGGERKDVPKGSFELDPAGLPKSVFQVQVGDPGDVMDDGRLNNGVSSCQESSKCKVDQAKCNESIPKAKLRESGGPERVTPINKKPPMSKAENMGNGHTSTSQHMVREPDKNTSHRDYSQPEGSEAVASQTNKNFKSPQKPNKRNYHVETSTVRRSPRDLSKKNDAGGAGECATSKLADNHSNTNNNVKETQSVESGRACLRKDSGVMGARHDFNKEKSREMFQCGQIWAIYGDRDNMPDVYVQIKKIESTSNFRLHVSELEPCSPPEGFKRAISCGSFKIKKAKPQILSPSAFSHQLKVEPKENSIYEIYPKKGEIWALYKDQNYELTSSDQDRGRSECHIVEVLADSDKGIEVVILLRFSGSQPIFKAPIMRRSKTGVIEILREEVGRFSHQVPAFQHSGEDDLHLRGCWVADPSSIPGVAV* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0214 1003 MobiDBLite consensus disorder prediction 755 773 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 232 400 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 644 779 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 726 744 - -
Psa3g0214 1003 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 193 216 - -
Psa3g0214 1003 PANTHER - 500 607 - -
Psa3g0214 1003 PANTHER - 707 999 - -
Psa3g0214 1003 PANTHER - 1 482 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 698 725 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 364 386 - -
Psa3g0214 1003 CDD DnaJ 67 120 IPR001623 -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 333 356 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 271 324 - -
Psa3g0214 1003 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 482 - -
Psa3g0214 1003 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 500 607 - -
Psa3g0214 1003 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 707 999 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 194 214 - -
Psa3g0214 1003 MobiDBLite consensus disorder prediction 683 697 - -
Psa3g0214 1003 Gene3D DnaJ domain 52 151 IPR036869 -
Psa3g0214 1003 SMART dnaj_3 66 123 IPR001623 -
Psa3g0214 1003 PRINTS DnaJ domain signature 69 87 IPR001623 -
Psa3g0214 1003 PRINTS DnaJ domain signature 87 102 IPR001623 -
Psa3g0214 1003 PRINTS DnaJ domain signature 103 123 IPR001623 -
Psa3g0214 1003 Pfam Domain of unknown function (DUF3444) 790 982 IPR024593 -
Psa3g0214 1003 Pfam Domain of unknown function (DUF3444) 500 582 IPR024593 -
Psa3g0214 1003 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Psa3g0214 1003 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0214 Psa-Chr3 23370066 23373250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0214 4 187 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.804 5.94e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0214 - - mtr:MTR_7g114150 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0214 3 23370066 23373250 Psa3g0214 3 23370066 23373250 ECH