Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0209 ATGGGATGTGTGATTAGTCGTCAAGCAGTAACATCTGAGAAGAAGGGTTCAGGTGGTGAAAGTAATAGGAAGGTTGATGAGGTTGATAATGGTTGTGAGAAGGAGAAGATTGGTGGTGGTGATAGGGTTCAGCAGTGTCGAGGCGAAAGTCGAAGATCGAAGGCGAATCCGAGGTTAAGTAATCCGCCGAAGCATTTACTTGGGGAACAGGTTGCTGCTGGATGGCCACCTTGGCTTACTGCTGTCTGTGGGGAGGCTCTTAGTGGATGGATTCCGCGAAAGGCGGATAGCTTTGAGAAAATTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCTAAAGACTCGTTGACGGGTAAAATTGTTGCTCTCAAGAAGGTTCGTTTTGACAATTTGGAACCGGAGAGCGTTCAGTTCATGGCTAGAGAGATTCTTATTCTGCGAAGGTTGGATCATCCAAATGTTATTAAGCTGCACGGTTTAGTTACATCAAGGATGACTTGTAGTTTGTATTTGGTGTTTGATTACATGGAACATGATTTAGCTGGACTTGCTGCAAGCCCGGAAATCAGGTTTACAGAGCCTCAGATAAAATGTTACATGAATCAGTTGCTATCAGGACTTGAGCATTGTCATAACCGACATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTGTCGATAATGAAGGAATACTAAAGATTGCCGACTTTGGGTTGGCATCCTTTTTTGATCCAAACCATAGGCATCCCATGACCAGTCGTGTAGTTACACTTTGGTATCGGCCTCCAGAGTTGCTTCTTGGTGCTACAAGTTATGGTGTGGGCGTAGACCTTTGGAGTGCTGGATGCATTTTAGGAGAGTTATTGGCCGGGAAACCAATTATGCCCGGCCGTACAGAGGTGGAGCAACTGCATAAAATATACAAACTATGTGGTTCACCTTCTGATGAATACTGGAAGAGGTCAAAGTTGCCCAATGCTACCTTGTTTAAACCTCGAGATCCGTACAAGAGATGCGTAAGAGAGACATTCAAAGGTTTTCCACCGTCTGCTCTACCCCTTATTGATAATCTTCTTGCAATCGATCCGGTAGAACGGAAAACCGCCTCAGATGCTTTAAGAAGTGAGTTCTTTATGACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATACCCCCCAAGCAAAGAAATGGATGCTAAAAGACGAGATGATGAAATGAGGAGACAAAGAGCTGCAAACAAAACTCGGGTTGATGGTTCAAAGAAGCATCGTACTCGTGATCGTGCTGTGAAAGCTTTTCCTGCTCCCGAAGCCAATGCCGAGCTTCAATCCAATATAGATAGAAGACGTCTAATCACTCATGCAAATGCCAAGAGCAAGAGTGAAAAGTTTCCTCCACCACATCAAGATGCACAACTTGGTGTTCCTTTGGGATCTTCGCATCGTATTGATCCAGACACTATTCCCGCAGATGTATCTTTCATTTCAACCACATATACGTATTCAAAGGAACCCTTCCAAGCTTGGTCGGGTCCAATTGGTAATGATGCTGATATTGGATTGCCGATGCAAAAGAAACACATCGCAGGAGATGTATTCGATTTATCAAAATCACCGAAAGGTGCTCACATGGACAAGTTTAAAGGAAAGGGAATTATAGCTTAG 1683 0.4349 MGCVISRQAVTSEKKGSGGESNRKVDEVDNGCEKEKIGGGDRVQQCRGESRRSKANPRLSNPPKHLLGEQVAAGWPPWLTAVCGEALSGWIPRKADSFEKIDKIGQGTYSNVYKAKDSLTGKIVALKKVRFDNLEPESVQFMAREILILRRLDHPNVIKLHGLVTSRMTCSLYLVFDYMEHDLAGLAASPEIRFTEPQIKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLVDNEGILKIADFGLASFFDPNHRHPMTSRVVTLWYRPPELLLGATSYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKRSKLPNATLFKPRDPYKRCVRETFKGFPPSALPLIDNLLAIDPVERKTASDALRSEFFMTEPYACDPSSLPKYPPSKEMDAKRRDDEMRRQRAANKTRVDGSKKHRTRDRAVKAFPAPEANAELQSNIDRRRLITHANAKSKSEKFPPPHQDAQLGVPLGSSHRIDPDTIPADVSFISTTYTYSKEPFQAWSGPIGNDADIGLPMQKKHIAGDVFDLSKSPKGAHMDKFKGKGIIA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0209 560 MobiDBLite consensus disorder prediction 400 432 - -
Psa3g0209 560 Gene3D Transferase(Phosphotransferase) domain 1 181 422 - -
Psa3g0209 560 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Psa3g0209 560 CDD STKc_CDK9_like 98 382 - -
Psa3g0209 560 SUPERFAMILY Protein kinase-like (PK-like) 92 388 IPR011009 -
Psa3g0209 560 PANTHER CELL DIVISION PROTEIN KINASE 37 533 - -
Psa3g0209 560 MobiDBLite consensus disorder prediction 1 65 - -
Psa3g0209 560 Pfam Protein kinase domain 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0209 560 PANTHER OS01G0367700 PROTEIN 37 533 - -
Psa3g0209 560 MobiDBLite consensus disorder prediction 394 432 - -
Psa3g0209 560 MobiDBLite consensus disorder prediction 17 54 - -
Psa3g0209 560 Gene3D Phosphorylase Kinase; domain 1 85 180 - -
Psa3g0209 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Psa3g0209 560 ProSiteProfiles Protein kinase domain profile. 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0209 560 SMART serkin_6 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0209 Psa-Chr3 23139982 23144218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0209 90 420 Core Cell Cycle Gene Families AT5G10270 53.026 2.16e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Psa3g0209 Pkinase 9.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0209 K08819 - gmx:100786837 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0209 3 23139982 23144218 Psa6g3390 6 290637815 290645514 PCT