Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0200 ATGTCTTCTGAATTTCTTCGAATGTTAAACACTTCGGATTATTCATCCGTAATATCTATGAACATATTTGTCGCATTGCTATGCGGTTGTATAGTACTTGGTCATCTTCTCGAGGATAATCGCTGGGTTAACGAATCTATCACAGCTCTTCTGATAGGTCTTTGCACTGGCGAGGTTATTTTGTTGATAAGTCGCGGAAAAAGCTCGCATCTTCTTGTTTTCAGCGAAGATCTTTTTTTCATATACCTTCTACCTCCCATCATATTCAATGCCGGGTTTCAGGTGAAAAAGAAACGGTTTTTTGTTAATTTCATGACAATTATGATGTTTGGTGCTGTTGGTACATTGATAAGTTGTAGCATCATAAGTTTTGGTGTATTACAAATTTTTAAGAGATTGGGTTTCCGCGAACTCGATCTAGGAGATGCTATAGCAATTGGAGCGATATTTGCCGCGACAGATTCAGTGTGCACATTGCAGGTGTTAAACCAGGATGAGACACCTTTACTATACAGCCTTGTATTTGGCGAGGGCGTTGTGAATGATGCTACTTCGGTGGTGCTTTTCAACGCAATCAAAAGTTTTGATCTTGAACGATTCGACCATGGACTTGTCTTGCAATTTTTCGGCAACTTCTTGTATTTGTTTATAGCAAGCACCATGCTTGGAGTTTTGGGTGGTCTACTTAGTGCTTACATTATCAAAAAGCTCTATTTTGGAAGGCACTCAACTGATCGCGAGGTTGCTCTCATGATGTTAATGGCATACCTTACCTATATACTAGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTCTGTGGAATTGTAATGTCTCATTATACATGGCATAATGTGACTGAGAGCTCAAGAATCACTACCAAACATTCATTTGCAACCTTGTCATTTGTTGCCGAGACGTTTCTCTTCCTTTACGTTGGTATGGATGCCTTGGACATGGAAAAATGGAGATTTGTTAGTGATAGACCTGGAACATCTGTTGTTGTGAGTTCAGTATTATTAGCCCTAGTCCTCATTGGAAGAGCAGCATTTGTTTTTCCCTTATCATTCTTATCCAACTTGACAAAAAAATCAGCAAATGAGAAAATAAGCTTTAGGCAACAGGTGATTATTTGGTGGGCTGGTCTTATGAGAGGCGCCGTTTCAATGGCACTTGCCTATAATCAGTTTACTATGTCGGGGCATACTCAACTTCGATTCAACGCCATCATGATCACAAGTACCATCACTGTCGTGCTTGTCAGTACAATGGTGTTTGGCATGATGACCAAGCCACTGATAAGGTTTTTGCTTCCACTCGGTCCCGTTCCAAAACGGAAAAGCAGCAGGGTGAATCTCGAAGGCACTTCACCGAAATCAGTCACAGTGCCATTCCTTGGAGATAATCAAGGTTCTGAAGTTGAGATTGATAGCAATGATTTTCACCGTCCAAGCAGCATTCGTGATTTACTCACCACTCCAACATACACTGTTCATCGGTTATGGCGTAAGTTTGATGATACAATAATGCGCCCGGTTTTTGGTGGTAGGGGTTTTGTTCCTGTTCGTCCTACTACGCAGAATGAAAATGATCAACCGCAGTGA 1611 0.4097 MSSEFLRMLNTSDYSSVISMNIFVALLCGCIVLGHLLEDNRWVNESITALLIGLCTGEVILLISRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKRFFVNFMTIMMFGAVGTLISCSIISFGVLQIFKRLGFRELDLGDAIAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLERFDHGLVLQFFGNFLYLFIASTMLGVLGGLLSAYIIKKLYFGRHSTDREVALMMLMAYLTYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHSFATLSFVAETFLFLYVGMDALDMEKWRFVSDRPGTSVVVSSVLLALVLIGRAAFVFPLSFLSNLTKKSANEKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQLRFNAIMITSTITVVLVSTMVFGMMTKPLIRFLLPLGPVPKRKSSRVNLEGTSPKSVTVPFLGDNQGSEVEIDSNDFHRPSSIRDLLTTPTYTVHRLWRKFDDTIMRPVFGGRGFVPVRPTTQNENDQPQ* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0200 536 Pfam Sodium/hydrogen exchanger family 22 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa3g0200 536 PANTHER SODIUM/HYDROGEN EXCHANGER 2 6 534 - -
Psa3g0200 536 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Psa3g0200 536 PANTHER SODIUM/HYDROGEN EXCHANGER 6 534 IPR018422 GO:0006812|GO:0015299|GO:0016021
Psa3g0200 536 Gene3D - 140 191 - -
Psa3g0200 536 PRINTS Na+/H+ exchanger signature 78 89 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa3g0200 536 PRINTS Na+/H+ exchanger signature 92 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa3g0200 536 PRINTS Na+/H+ exchanger signature 107 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa3g0200 536 PRINTS Na+/H+ exchanger signature 147 157 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0200 Psa-Chr3 22397636 22401389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0200 9 531 Antiporters AT3G05030 73.905 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0200 - - gmx:100787925 847.425