Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0193 ATGAATGGTGTAACACACCTTGAAACAGATGATGACTCAGATTTTGTTGAAGTTGATCCAACCGGTAGATATGGCAGATACAATGAAATTCTCGGTAAAGGAGCTTCTAAAACAGTATACAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAATCAAATCAAACTATATGATTTTCTGCAAAATCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTTCTCAAGACATTGAAACACAGAAACATAATGAAATTCTACACTTCTTGGGTTGATACTTCCAATAGGAATATCAACTTTGTCACTGAATTCTTTACTTCCGGTACTCTTAGACAGTATAGGTTAAAGCACAAGAAGGTTAACATAAGAGCAGTGAAGCATTGGTGTAGGCAGATCCTGCAAGGACTTTTATATCTTCATAGCCATGATCCACCTGTGATTCATAGAGATCTTAAATGTGATAATATTTTCATTAATGGTAATCAAGGGGAAGTTAAGATTGGGGATCTTGGTTTGGCTGCGATTCTCCGGAAATCACATGCTGCTCATTGTGTAGGAACGCCCGAGTTCATGGCGCCAGAAGTATATGAAGAGGAGTATAATGAATTAGTTGACATATATTCCTTTGGTATGTGCGTGTTAGAAATGGTCACATTTGAATATCCGTATAGCGAATGCAGCCATCCGGCACAAATCTACAAGAAAGTTTCTTCTGGGAAAAAACCAGACGCTTTGTATAAAGTGAAAGATCCTGAAACGCGAGAGTTTGTTGAGAAATGTCTTGCAACTGTATCTCTAAGGCTCTCTGCGAGGGAGCTTCTTGACGACCCTTTTCTTCGAATTGATGATTACGAATATAATTTGGGATCGGTAGATGTTGAAGAGTTTGTTGACTTGGGTCCTCTTGTTAGTCAGTCATTCTTTTCACTCGATCGTAGCTATAGTAACATAAGTACCGAATACTCAAATGGTTTCGGGTATGAAGCAGATTGTTATTCTCATCCGGCTGAGATTGAACACGGAATTGAACTTTTCGAGTGCCAAGACGATGAAACCTCCAAAGATGTTGACATAAGCATCAAAGGCAAGAGGAAAGACGACGGTGGCATCTTTTTGAGACTAAGAATCGCAGACAAAGAAGGTCGTATCCGAAACATTTATTTCCCATTTGACATAGAATTGGATACAGCATTAAGTGTAGCAACCGAAATGGTTGCAGAACTTGACATTACCGATCAAGATGTTACCAGAATAGCCGGTATGATAGACGGAGAAATCGCGTCGTTGGTACCAAAATGGAGGCGAGGACCGGGAGTCGAGGAAGCCGCCAACTATGAAAACCAAATTTTCTGCGAAAATTGTGTTTCTAATCATACTACAGTTACGGATTTTCTTTCCCGTAATCAAAGTGGAAAAAACTTGCAGCTTCTTCAATGCTGCATGCATGGATGTGCTTCAATGCACGGCCGTTTTGAAGAGATTACATTCCAATCCGAGGAGTACGACAACCACGTCAGCGAGGAAGCGCCTAACATATCAAGCGAATCTGACTTTTTACAGTATCAAGAATCGTGGAGTCATCATCAAGAAAGCCGCGAACTGAGTCCAGTAGAGTCTACTCAAAGCCCTTCAGACGAACATTACGAACTAGGAAACCATTCTACCATCGGTTCACTACATTGCGGAGTCGAGAATGATTATGAGAAAGAGATACAACACGAGTTGAGATGGCTGAAAGCAAAATATCAAATGGAGTTAAGGGAGCTTAGGGATAAACAAATAGGACTAGAACCAAAATCGCCGCATACGAGCAGCAACATAAAGCACGAAACAACATCAGAAACAGTAAACGGATTCGATAATTACCGGGATTACGATTCTCGAGAGCACAAGAGCCAACCCGATTTGGAGACCCGAAGGGCTCAAAATTGCGGCGCGGTGTATTGCGACGAAGAAAATATGGCTACTGCAAAGAGTTTCTACAGAAGGCTGTTGCTTCAAGAGACTCTACACAGAAGTGTTTCACTTCCTGTTGATGCTGTGGATGTATAA 2061 0.4105 MNGVTHLETDDDSDFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQIKLYDFLQNPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTSNRNINFVTEFFTSGTLRQYRLKHKKVNIRAVKHWCRQILQGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEEYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVSSGKKPDALYKVKDPETREFVEKCLATVSLRLSARELLDDPFLRIDDYEYNLGSVDVEEFVDLGPLVSQSFFSLDRSYSNISTEYSNGFGYEADCYSHPAEIEHGIELFECQDDETSKDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIELDTALSVATEMVAELDITDQDVTRIAGMIDGEIASLVPKWRRGPGVEEAANYENQIFCENCVSNHTTVTDFLSRNQSGKNLQLLQCCMHGCASMHGRFEEITFQSEEYDNHVSEEAPNISSESDFLQYQESWSHHQESRELSPVESTQSPSDEHYELGNHSTIGSLHCGVENDYEKEIQHELRWLKAKYQMELRELRDKQIGLEPKSPHTSSNIKHETTSETVNGFDNYRDYDSREHKSQPDLETRRAQNCGAVYCDEENMATAKSFYRRLLLQETLHRSVSLPVDAVDV* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0193 686 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0193 686 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0193 686 MobiDBLite consensus disorder prediction 526 549 - -
Psa3g0193 686 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0193 686 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 557 - -
Psa3g0193 686 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 556 646 - -
Psa3g0193 686 Gene3D - 371 455 - -
Psa3g0193 686 CDD STKc_WNK 23 282 - -
Psa3g0193 686 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Psa3g0193 686 SUPERFAMILY Protein kinase-like (PK-like) 28 283 IPR011009 -
Psa3g0193 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Psa3g0193 686 Gene3D Phosphorylase Kinase; domain 1 8 106 - -
Psa3g0193 686 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 427 IPR024678 GO:0004674|GO:0005524
Psa3g0193 686 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 556 646 - -
Psa3g0193 686 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0193 Psa-Chr3 22115149 22118915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0193 1 610 MAP Kinase Kinase Kinase AT3G22420 51.433 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa3g0193 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0193 K08867 - gmx:100775959 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0193 3 22115149 22118915 Psa3g0193 3 22115149 22118915 ECH
Psa3g0193 3 22115149 22118915 Psa6g3368 6 289829920 289834193 PCT