Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0187 ATGGGGAAGGCGAGTAAATGGATTAGAAACCTTCTTCTAGGGAAAAAAGAAGAGAACTTCAAGCAGATTGATACTTTCTGCTCGGAGAATAAGGCCGCGAACGCGGTTAAAATTAGTAGTAGTAATAGTAGTAGTAATAAAATGGTAGTGAAGCGGAAATGGAGCTTTCGAAAACTAACAAGTGGAAGATCAACCGGAAAGATAGTAGCTCATAAAGTTTCCAGGTCTTTTGATTCAATTGATTCTCCAAAATTGCAAATTCAAGCCTTAATGTTCCAAACTCAGACTCCAAGAACAGCTGCTGAGTTTGTAAAAAGAGCTGCTACAAGGATTCAAGCTTCCTTTCGCTCCTATTTGGCAAGGAGGGCACTGCATGCTTTAAGAGGATTGGTGAAGTTACAAGCATTAGTGAGGGGTCATCTTGTAAGGAAACAAACAACTGCAACCCTGCGAGGGATGCATGCGTTGATGTCCATACAAGTTCGAGCTCGAATCAAAAGGATTAAGATGGCTGAAGAAGAAGTAAATCCACTCGAAATACAACCTCCCCAACACACCGAAAATTCTTATTTCAAACATCACAAAACACAACAAAAACAAAATCAAGATTCGAAGAATATGAGCGTGGAAGAAATGTTGGGAGTAATGAGAAGTAGAAGTGGCCCTCTAGATGTAAAAAGCAGAAAGTACGATTCAATGGCGTATTATTCGAATCAGTTGAAGAAGGAGAATAATGATAATAATAATTCTACAAAAACCATCACAGTACCAAACAGTCCAGAAAAATACTTCAAAGAAATGATTGAATATTTGAAGCCAACAGCATCATCTCAGCGTGACATATTACCTCCTAGACAATCATGGTCATCACCAAATTACATGAACAAGACGGAATCGTCAAAGGCGAAAACAAGGTCTAGTAGTGAACCAAGACAAAGACCAAAACAAGGGACGAAGCAAAAGAGTAGCAAGAGTGTAGAAGGTGGTTTGTTGAGGCAAAATATGTTGTCGCGTTCAGCAAGGTATGATCATTGGGTTGTTAATTCAATGAAGGAGAGTAAACGTGATTCTTTTGGTAGCTGCACGGTTACTACTAGTGATGATTCCTACTACATGTGA 1119 0.3923 MGKASKWIRNLLLGKKEENFKQIDTFCSENKAANAVKISSSNSSSNKMVVKRKWSFRKLTSGRSTGKIVAHKVSRSFDSIDSPKLQIQALMFQTQTPRTAAEFVKRAATRIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRIKMAEEEVNPLEIQPPQHTENSYFKHHKTQQKQNQDSKNMSVEEMLGVMRSRSGPLDVKSRKYDSMAYYSNQLKKENNDNNNSTKTITVPNSPEKYFKEMIEYLKPTASSQRDILPPRQSWSSPNYMNKTESSKAKTRSSSEPRQRPKQGTKQKSSKSVEGGLLRQNMLSRSARYDHWVVNSMKESKRDSFGSCTVTTSDDSYYM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0187 372 MobiDBLite consensus disorder prediction 302 316 - -
Psa3g0187 372 MobiDBLite consensus disorder prediction 275 334 - -
Psa3g0187 372 MobiDBLite consensus disorder prediction 279 301 - -
Psa3g0187 372 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 355 - -
Psa3g0187 372 ProSiteProfiles IQ motif profile. 105 132 IPR000048 GO:0005515
Psa3g0187 372 Pfam Protein of unknown function (DUF4005) 248 340 IPR025064 -
Psa3g0187 372 PANTHER IQ-DOMAIN 5-RELATED 1 355 - -
Psa3g0187 372 MobiDBLite consensus disorder prediction 239 258 - -
Psa3g0187 372 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Psa3g0187 372 Gene3D - 101 155 - -
Psa3g0187 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 146 IPR027417 -
Psa3g0187 372 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Psa3g0187 372 Pfam IQ calmodulin-binding motif 131 145 IPR000048 GO:0005515
Psa3g0187 372 SMART iq_5 103 125 IPR000048 GO:0005515
Psa3g0187 372 SMART iq_5 126 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0187 Psa-Chr3 21873821 21876147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0187 1 316 IQD Protein Family AT4G14750 34.104 4.50e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0187 - - gmx:100527816 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0187 3 21873821 21876147 Psa3g0187 3 21873821 21876147 ECH