Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0169 ATGGAAAGAGTGTTTTCAATTGCAGAAATTACTGAACAATATTGGTTAACATCTAAGGCTGGTAAAGAAGGAGAATCAAAGATGAATAGAAGTGATTCTGAATGGGCTTTTCAACAGTTTCTTCAACAACAAGAACAAGAAGCTGCAAATACTTCTAATGCAAAGCCTTGTTCTTCCTCTTCAACTTCAACTTCAACTTCTTCTTCCAACCTTGATCTCAAACTCAAAATCAATAACAATAATAATAATAATAATAATATCAATGATTCTCAGGATTACTATGCTATTCTCAAAACCAAGCTCGATCTCGCCTGCGCCGCAGTCGCCATGTCTCGGGGAACTTTGGTGAAATCTCAGGAACCAGACAATGGATCACATGCAGCTTATGCTTCTGAACTTGGAGCTTCTGGAAATGATTCATCTAAATTGCTAAATAAAGATGGGATGAAAGTAGGTCAAAAGAAGCCTGTTGTTTCAATCAGGTCAACAACAAGTGGTTCATCAGATGATGAAGAAGCTGAGGGAGAGATTAATATGAATGGAGACATGAATCCTTCTGATGCAAAAAGAGTAAGAAGGATGCTCTCTAATAGGGAGTCTGCTAGACGTTCGAGACGAAGAAAACAAGCTCATTTATCTGAGCTTGAAACACAGGTTTCTCAATTAAGAGGTGAAAAATCTTCATTGTTAAAGAATTTAACAGATGTGACTCAAAAGTACAATGATTCTGCTGTTGACAACAGAATATTAAAAGCTGATGTTGAAACCTTAAGAGCAAAGGTGAAGATGGCTGAAGAGACGGTTAAGAGATTTACTGGATTGAATCCGATGTTTAATGAAATATCTGAGTTATCATCAATGGGAATGGGAATGTCATTATTTGATGGAAGCCCTTCTGAGTCATCAGCTGATGCATCTGTGCCTGAAGGTTCAAATAATCACTTCTGTCAACCAGCTTCTAGTAATCTTATGTCAAGTCATAATATAAGAGCTGACAATATGCAGATGAACACTGCAGCAGGGAACAAGATAGGGAGAACAAACTCCTTGCCGCGAGTGGCTAGCTTGGAACATCTTCAGAATCGGATTCGCGGTGGTGCTGATGAAGACAAGTAA 1116 0.3835 MERVFSIAEITEQYWLTSKAGKEGESKMNRSDSEWAFQQFLQQQEQEAANTSNAKPCSSSSTSTSTSSSNLDLKLKINNNNNNNNNINDSQDYYAILKTKLDLACAAVAMSRGTLVKSQEPDNGSHAAYASELGASGNDSSKLLNKDGMKVGQKKPVVSIRSTTSGSSDDEEAEGEINMNGDMNPSDAKRVRRMLSNRESARRSRRRKQAHLSELETQVSQLRGEKSSLLKNLTDVTQKYNDSAVDNRILKADVETLRAKVKMAEETVKRFTGLNPMFNEISELSSMGMGMSLFDGSPSESSADASVPEGSNNHFCQPASSNLMSSHNIRADNMQMNTAAGNKIGRTNSLPRVASLEHLQNRIRGGADEDK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0169 371 Pfam bZIP transcription factor 188 240 IPR004827 GO:0003700|GO:0006355
Psa3g0169 371 Gene3D - 188 242 - -
Psa3g0169 371 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 241 IPR004827 GO:0003700|GO:0006355
Psa3g0169 371 Coils Coil 247 267 - -
Psa3g0169 371 Pfam Basic leucine-zipper C terminal 256 367 IPR020983 -
Psa3g0169 371 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Psa3g0169 371 PANTHER BASIC LEUCINE ZIPPER 63 1 368 - -
Psa3g0169 371 PANTHER BASIC LEUCINE ZIPPER 63 1 368 - -
Psa3g0169 371 Coils Coil 198 232 - -
Psa3g0169 371 MobiDBLite consensus disorder prediction 45 70 - -
Psa3g0169 371 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Psa3g0169 371 MobiDBLite consensus disorder prediction 147 186 - -
Psa3g0169 371 SUPERFAMILY Leucine zipper domain 189 239 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0169 Psa-Chr3 20590463 20592633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0169 1 278 bZIP Transcription Factor Family AT4G02640 39.617 1.78e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa3g0169 bZIP_C 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0169 K25784 - gmx:778137 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0169 3 20590463 20592633 Psa3g0169 3 20590463 20592633 ECH