Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0142 ATGTTTTTGACACTATCTTACCGATGGAGTGATGTAGGCAATGCAGGACAAGGTTTCAGTGTACATGTCATTGCTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGCAATTTGTGCAACAAAATAGGGGTGAAATATGCATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGCCAACCGGCATCTTCAGGAGGCAACATTACGTATGAGGGTCGGTTTGATATTATTTCACTTACCGGTTCCTATGTCCGTAATGAAACTGGGGGGCGAAGTGGTGGTCTCAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGCGGTGGTATTGGTGGGCCTCTTAAAGCTGCTGGTCCCGTTCAGGTCATTGTTGGTACATTTTCTGCCGACAACAAGAAGGATACTAGTGCTGGTGGAAAAGTGGATGCCTCTGCCGGTAAGTTGCCATCACCAGTTGGCGAATCAGCATCAAGTTTAGGTTTCCGTCAAACAGTTGACAGTTCCAGCGGGAATCCAATGCGGGTAAATGATGAACATCAAACCATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCATGTCACACCTCCCAGGTCCACAGACTGGGGAAGTCATCCAGATTCAAGACATGCTGGTTATGACCTATCAGGAAGAACAGGTCACGGGTCGCACCAGTCTCCTGAGAATGGAGGCTATGACCAAATTCCTGATTGA 732 0.4686 MFLTLSYRWSDVGNAGQGFSVHVIAVAAGEDVGQKIMQFVQQNRGEICILSASGSISNASLRQPASSGGNITYEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGIGGPLKAAGPVQVIVGTFSADNKKDTSAGGKVDASAGKLPSPVGESASSLGFRQTVDSSSGNPMRVNDEHQTMGGSHFMIQQLGLHVTPPRSTDWGSHPDSRHAGYDLSGRTGHGSHQSPENGGYDQIPD* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0142 243 MobiDBLite consensus disorder prediction 204 243 - -
Psa3g0142 243 MobiDBLite consensus disorder prediction 160 176 - -
Psa3g0142 243 MobiDBLite consensus disorder prediction 137 176 - -
Psa3g0142 243 CDD DUF296 21 131 IPR005175 -
Psa3g0142 243 Gene3D - 20 146 - -
Psa3g0142 243 ProSiteProfiles PPC domain profile profile. 15 155 IPR005175 -
Psa3g0142 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 235 IPR039605 GO:0003680
Psa3g0142 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 10 235 - -
Psa3g0142 243 SUPERFAMILY AF0104/ALDC/Ptd012-like 18 132 - -
Psa3g0142 243 Pfam Plants and Prokaryotes Conserved (PCC) domain 21 132 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0142 Psa-Chr3 17059621 17063908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0142 12 243 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 53.785 9.84e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0142 - - adu:107491998 375.555