Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0121 ATGAGTTGCTTTCCTTGTTTTAATTCTCAAAGGAGTAAGAAAAGCAACAGCAAGAGGGAACATGGGGTTGCGCCGCCGCAGGAAAACAACACACTTATAACAAGAACACCAGATATAAAGAAACCAAAACCAGAGGAAACAAACCAAGTTGACACATCAAATATTCAAGCACAAAATTTCACATTTCGCGAGTTGGCAATTGCGACCAAGAATTTTAGACAAGAGTGTTTGATGGGTGAAGGTGGTTTTGGAAGAGTTTATAAAGGAACAATTCCGGCAACAGGACAGGTGGTAGCAGTGAAACAACTTGACAGAAATGGGATTCAAGGAAGTAAAGAATTTTTGGTTGAGGTTTTGATGTTGAGTCTCTTAAACCATGAAAATTTGGTTAAACTTACTGGTTATTGTGCCGACGGTGATCAACGTCTTTTGGTGTATGAGTTCATGTCAGGAGGTTCTCTAGAAAGTTGTCTTCTTGAGAGAAAACCCGAACAACCTCAATTAGATTGGTATAGCAGAATGAAAATAGCATCTAATACTGCGAAAGGACTATGGTACTTGCACGACAAGGCAAATCCCTCGGTTATTTATAGGGACTTGAAATCTTCCAATATTTTGCTTGATAATGACCATAACGCAAAGCTATCTGATTATGGACTAGCGAAACTTGCTGGTAAAGATAAGATGAACATTGTTCCTACAAGAGTAATGGGCACTTATGGTTATAGTGCGCCCGAGTATGTAAGAACGGGTAATCTCACCTTGAAATCAGATGTTTATAGTTTTGGAGTTGTCTTGCTAGAACTCATAACTGGAAGACGAGCCGTTGACACCACAAAATCGCACGACGAGCAAAATCTAGTTTCATGGGCACAACCGATATTTAGAGATCCAAAAAAGTATGGAGATTTGGCAGATCCGAAGCTGAAATATTACCCGGATAAGGATCTGAATCAGGTTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAAGCCGCTGCGCGTCCTTTGATGAGTGATGTGGTAACTGCTTTGAGTTTTCTTTCAACTTCTCCTCCTCCTGGAGGTGTTCCTGAACCTCTTCCACCTCCCGATTCCACCTCCCAAAAGAGTGTTGCGACTGCCAATGAAAGCGAGAGTGAGGGCAATAAGAATAAACCACCTATTGCAGCAGATAGTGCGAAATACGAAGAATGTGAAGAAGGATCAGACGAAGAATCTGAAGAAGGATCAGACAATGAATGTGATTATTATGAGAATGAAAACCATGAATATAGTCCACAAGATACTAAAGAAACAAAGGAGCTTCACTCTCAATCAAGCCGCAAGAGCAGCACAAAATCAAAGAACTCATGTTCCGGTTCAGAAAATGGTCGCAAAAGCGGTAGGAGAAAGCAAGCCGCGGATGGAAGTTTAGCTCAGAAAAGCAGCAAAAAATCTGCTGCAGGAAATTTAAGCCAGAAGAGCAGTAAGAAATCTCGCGAGCAAAAGAACAGTAAAAAATCTTCAAAAGCTAAAAATCAGTCATCTGATAGTAGCAGCAGCAGCGAAGAGTCACAAGATGAAAGTGTTCTTCTCAAGCATGGTGACGATAGGAAATCACCCGATGGAAACAAATATTCTTTTGGGCTAATAAGCAGCGATAGCGGGGAAGGATCACACGTAGAAGTTCATCATTTCGATCGTGTCAGCATGGGGCCATCTGAGGGGGAAAGTTCTCACCATTCTAAACATTCCAGCAGCGGAGGATCAGATGAGGGAAGTGTTCACTCACCACGATAG 1782 0.4186 MSCFPCFNSQRSKKSNSKREHGVAPPQENNTLITRTPDIKKPKPEETNQVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGIQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMSGGSLESCLLERKPEQPQLDWYSRMKIASNTAKGLWYLHDKANPSVIYRDLKSSNILLDNDHNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTKSHDEQNLVSWAQPIFRDPKKYGDLADPKLKYYPDKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTSPPPGGVPEPLPPPDSTSQKSVATANESESEGNKNKPPIAADSAKYEECEEGSDEESEEGSDNECDYYENENHEYSPQDTKETKELHSQSSRKSSTKSKNSCSGSENGRKSGRRKQAADGSLAQKSSKKSAAGNLSQKSSKKSREQKNSKKSSKAKNQSSDSSSSSEESQDESVLLKHGDDRKSPDGNKYSFGLISSDSGEGSHVEVHHFDRVSMGPSEGESSHHSKHSSSGGSDEGSVHSPR* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0121 593 Pfam Protein kinase domain 74 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0121 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Psa3g0121 593 MobiDBLite consensus disorder prediction 443 457 - -
Psa3g0121 593 MobiDBLite consensus disorder prediction 503 520 - -
Psa3g0121 593 MobiDBLite consensus disorder prediction 352 593 - -
Psa3g0121 593 PANTHER OS07G0668900 PROTEIN 1 557 - -
Psa3g0121 593 MobiDBLite consensus disorder prediction 521 537 - -
Psa3g0121 593 MobiDBLite consensus disorder prediction 366 383 - -
Psa3g0121 593 MobiDBLite consensus disorder prediction 398 415 - -
Psa3g0121 593 Gene3D Phosphorylase Kinase; domain 1 35 148 - -
Psa3g0121 593 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0121 593 SMART serkin_6 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0121 593 MobiDBLite consensus disorder prediction 470 489 - -
Psa3g0121 593 Gene3D Transferase(Phosphotransferase) domain 1 149 352 - -
Psa3g0121 593 SUPERFAMILY Protein kinase-like (PK-like) 58 373 IPR011009 -
Psa3g0121 593 MobiDBLite consensus disorder prediction 416 442 - -
Psa3g0121 593 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 557 - -
Psa3g0121 593 MobiDBLite consensus disorder prediction 1 54 - -
Psa3g0121 593 MobiDBLite consensus disorder prediction 22 36 - -
Psa3g0121 593 CDD STKc_IRAK 78 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0121 Psa-Chr3 13753642 13755860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0121 1 379 Glycoside Hydrolase AT3G07070 61.125 2.64e-162 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Psa3g0121 Pkinase 7.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0121 - - gmx:100807682 664.455