Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0120 ATGGCTCGCCTCCCTGCCATTCCATTTCTCACTTTTGCTATCCTTATAAACTCTTTCCTGCTCATATCTCCTGCACCCAACCACACACAAGGTACATGTGCATTGGATTTCAATGCATCCCAATATGAGTATATGCCATTTGGTGAATGTGGAAGTGTCAAAGAAGATATAACAAACTGGGGTAGCACTAGTGATGGTTTCCCAACTACTGTCTGCTGCAGAAATTCCCTTACCCTACTCTCCGACGCCCTCGCCTCGCAAGTCCGTAACTCGACCGGACAAATCTTTCTTTCTCAACAACAATGGCAGAGTTGCAACAAATCATTCCATCCGCAACAAGGGATGTCTCTATCTTCATGTGGCTTTGATAACATTTACCTTGGTAGCTCCAAATGCTCCAACTTATATTTGCTTGATGCTCAGAACTTGCAACAGTTCACAGATGCATTGCAAAAATGTAGCCACTTTGATCATTCGTTTGAAGAGTCGTGTCTGGATTGTACGAGCGCGATTTTGAGCTTACGAGATGGTTTGTATGATAAAATGGTTGGTAAGGACAACTACAATGATACCGAGAGAGCCATATGTGGCGTAGCAGCTCTTGTTTCTGTTGCTTTTGAACAACAAGATGATCCTTTCCTTGCTGACAAATTCCTGCGATGCTTTCCGCCTCCAGCAGTATATAACAAGAAATCATCGATGAAGAAACTTGTGTTGGGAGTATTGGTGGTAGCGATCCTAGCATTATTGATTATTGTTTTTCTGGTAAAATGTGTATCAAAGAAGAAGCCTGTTAAGAAGCATGCTCAGTTGAAACAGATAGCTACTTGGTCTGGATTGTACTGGTTCACGAAAACCGAAATTGAAAATGCGATGAATTTTGAAAATGAAAAGATAAACCTTGGACGTGGGAGTGCAGGCGAGGTGTATAGAGGCGTTTTGCCTAGTGGTCAAGTTGTGGCAATCAAGCATTTGATAAAGAGTAACACGTCGAGTTCTGATTCGTTCACCCGAGAACTTGCAGGCCTTTCTAGGCTTCGTCACCCGAACCTGGTTTGCTTGTTTGGTTGTTGCATGGAAGATGGCGAGAGATATTTAGTCTACGAGTTTTGCGCAAATGGAAATCTTGCTCAACATCTCTTGAGAAGAGATAGTCATTTGACATGGGAAGCAAGAGTGAGGATTCTGCGAGAATGTTCATTTGCACTTAAGTATCTCCATCATCACATCGAGGGTTGTGTTGTACATAGAGATATCAAGCTTACGAACATTCTCTTGACTGAGAAATACGAAGCCAAACTGTCGGATTTCGGACTGTCAAGGATGATGGGAATGGAAGAGAGCAAGGTTTTCACTGATGTTAGAGGAACCATAGGTTATATGGATCCCGAGTACATGAGTAATGCGAAGCTAACTTGCGCAAGTGATGTATACAGTTTCGGAATCGTTGCTTTGCAAATTCTGTCGGGACAGAAAGTCATAGAATTGGATCTCGATGCGAGAGACCAGCTCACCAGAAAGGCAAGAGATGTGAGTATGGGAAAGCGTCCACTGTCAGATTTTGTAGACTCGCGACTAAAGGGACAAGTTGATAAGACGGATTTCGGAACTATTTTACAGATTGCAGTACTTTGTGTTGCAAAATCAAGCACCGGTCGTCCATCAATTGAGGTCGTTTTTGACGAATTGGACAAAGTCTATAGGGACATAGAAGCACGCAAGAAGACAACCCCAACACCATCAACAACAACATCAACATCCAGCTCTAATTGA 1773 0.4287 MARLPAIPFLTFAILINSFLLISPAPNHTQGTCALDFNASQYEYMPFGECGSVKEDITNWGSTSDGFPTTVCCRNSLTLLSDALASQVRNSTGQIFLSQQQWQSCNKSFHPQQGMSLSSCGFDNIYLGSSKCSNLYLLDAQNLQQFTDALQKCSHFDHSFEESCLDCTSAILSLRDGLYDKMVGKDNYNDTERAICGVAALVSVAFEQQDDPFLADKFLRCFPPPAVYNKKSSMKKLVLGVLVVAILALLIIVFLVKCVSKKKPVKKHAQLKQIATWSGLYWFTKTEIENAMNFENEKINLGRGSAGEVYRGVLPSGQVVAIKHLIKSNTSSSDSFTRELAGLSRLRHPNLVCLFGCCMEDGERYLVYEFCANGNLAQHLLRRDSHLTWEARVRILRECSFALKYLHHHIEGCVVHRDIKLTNILLTEKYEAKLSDFGLSRMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFVDSRLKGQVDKTDFGTILQIAVLCVAKSSTGRPSIEVVFDELDKVYRDIEARKKTTPTPSTTTSTSSSN* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0120 590 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 45 572 - -
Psa3g0120 590 Gene3D Transferase(Phosphotransferase) domain 1 371 585 - -
Psa3g0120 590 Gene3D Phosphorylase Kinase; domain 1 265 370 - -
Psa3g0120 590 PANTHER OS01G0253100 PROTEIN 45 572 IPR045271 GO:0004714|GO:0006468
Psa3g0120 590 MobiDBLite consensus disorder prediction 571 590 - -
Psa3g0120 590 Pfam Protein kinase domain 299 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0120 590 MobiDBLite consensus disorder prediction 576 590 - -
Psa3g0120 590 SMART serkin_6 294 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0120 590 ProSiteProfiles Protein kinase domain profile. 295 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0120 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Psa3g0120 590 SUPERFAMILY Protein kinase-like (PK-like) 278 569 IPR011009 -
Psa3g0120 590 Pfam SPARK 29 187 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0120 Psa-Chr3 13749953 13752832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0120 230 567 Receptor kinase-like Gene Family AT5G48740 36.338 2.37e-56 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Psa3g0120 Pkinase 8.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0120 - - mtr:MTR_7g116650 919.842