Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0095 ATGGGAACCAGTGAGGAAGAGAAATCTACCAAGACCGAAAAGCCTTCTTCACCTGTAACAGTTACCAATCAGACCAACCAGGCGAATATTCATGTCTATCCTGATTGGGCAACCATGCAGGCATATTATGGACCAAGAGTTGCCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGTCACCCTCCTCACCCATACATGTGGGGGCCACCACAGACTATGATGCAACCTTATGGACATCCTTATGCAGCAATGTATCCACATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATCCACATGGTCAAGGAATTTCATCTTCACCTGCTACCGGAACTCCTTTAAGCATAGAGACACCTCCCAAATCATCTGGAAATACCGATCAGGGTCTGATGAAGAAATTAAAAGGGTTTGATGGACTTGCGATGTCCATAGGAAATTGCCATGCTGAGAGTGCAGAGCCTGAAGCTGAAAGTAGGCTATCACACAGTGTGGATACTGACGGTTCGAGTGCTGGAAGTGACGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCGACTACTGATGGAGAAGAGAAAACTCAGACACAGGGAAGTGATGTTTCCAAAGAAATTGTAGCTTCTAACAAGATGATGGCAGTTGCCCCTGCCGGTGTAGCAGGACAACTAGTTGTGCCTGCAGTTTCTTCTGCAATGACCACTGCACTGGAGCTGAGAAAGCCTTCCACTGTTCATTCTAAAACAAATCCTGCCGCAGAAGGTTGGTTACAGAATGAGCGTGAACTGAAGCGTGAGAGGAGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCCGAGGCCGAAGAGCTGGCACGGAAAGTTGAAGCCTTGAATGCTGAGAGTGCCTCGCTTAAATCAGAAATAAATCGACTGGCTGAGAGTTCTGAAAAACTGAAGATGGAAAATGCTGCACTAAAGGAGAAATTTAAAATTGCTCAACTGGGACAACCAAAAGAGATAATTTTGACCAACATTGACAGCCAGTCCCAGAGGATTACACCTATAAGTACAGAAAACTTGTTATCAAGAGTTAATAATAATTCGGGTTCTAATGATAATAGAACTGTGGAGGATGAGAATGGTTATTGTGACAACAAACCGAACACTGGTGCAAAACTGCATCAACTACTGGATACAAGTCCTAGAGCTGATGCTGTGGCTGCTGGTTGA 1260 0.4563 MGTSEEEKSTKTEKPSSPVTVTNQTNQANIHVYPDWATMQAYYGPRVAMPPYYNSAVASGHPPHPYMWGPPQTMMQPYGHPYAAMYPHGGVYTHPAVPIGPHPHGQGISSSPATGTPLSIETPPKSSGNTDQGLMKKLKGFDGLAMSIGNCHAESAEPEAESRLSHSVDTDGSSAGSDGNTSGANQTRRKRSREGTPTTDGEEKTQTQGSDVSKEIVASNKMMAVAPAGVAGQLVVPAVSSAMTTALELRKPSTVHSKTNPAAEGWLQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVEALNAESASLKSEINRLAESSEKLKMENAALKEKFKIAQLGQPKEIILTNIDSQSQRITPISTENLLSRVNNNSGSNDNRTVEDENGYCDNKPNTGAKLHQLLDTSPRADAVAAG* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0095 419 PANTHER G-BOX-BINDING FACTOR 3 1 419 - -
Psa3g0095 419 MobiDBLite consensus disorder prediction 250 264 - -
Psa3g0095 419 MobiDBLite consensus disorder prediction 106 131 - -
Psa3g0095 419 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 419 IPR044827 GO:0003700|GO:0006355|GO:0043565
Psa3g0095 419 Pfam bZIP transcription factor 270 332 IPR004827 GO:0003700|GO:0006355
Psa3g0095 419 SMART brlzneu 270 334 IPR004827 GO:0003700|GO:0006355
Psa3g0095 419 Coils Coil 283 338 - -
Psa3g0095 419 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Psa3g0095 419 MobiDBLite consensus disorder prediction 167 186 - -
Psa3g0095 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 277 292 IPR004827 GO:0003700|GO:0006355
Psa3g0095 419 Gene3D - 273 344 - -
Psa3g0095 419 CDD bZIP_plant_GBF1 275 323 IPR045314 GO:0003700|GO:0006355
Psa3g0095 419 MobiDBLite consensus disorder prediction 1 26 - -
Psa3g0095 419 MobiDBLite consensus disorder prediction 107 131 - -
Psa3g0095 419 MobiDBLite consensus disorder prediction 153 213 - -
Psa3g0095 419 SUPERFAMILY Leucine zipper domain 273 329 IPR046347 GO:0003700|GO:0006355
Psa3g0095 419 MobiDBLite consensus disorder prediction 268 294 - -
Psa3g0095 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 272 335 IPR004827 GO:0003700|GO:0006355
Psa3g0095 419 MobiDBLite consensus disorder prediction 250 294 - -
Psa3g0095 419 Pfam Disordered region downstream of MFMR 131 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0095 Psa-Chr3 10930558 10935580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0095 1 419 bZIP Transcription Factor Family AT2G46270 50.827 1.42e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa3g0095 MFMR_assoc 9.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0095 K09060 - gmx:100781875 669.077