Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0091 AAAGAGTATGCCAGGTGGAAAGAGCAAGTGAAGATTTGCACAAACACAGGATTATTTAAAGGGTCTTTAGATGATGAGTATAGCTGGAGAAAATATGGTCAAAAAGATATTCTTGGAACTAAATTTCCCAGAGGATATTACAGATGCACACATAGAAAAGAACAAGGATGTTTAGCAACAAAACAAATTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTTACTTACATAGGAAGACACACATGCTCTCAACCTACAAACTCAAGAAGCTAG 276 0.3587 KEYARWKEQVKICTNTGLFKGSLDDEYSWRKYGQKDILGTKFPRGYYRCTHRKEQGCLATKQIQRSDEDPTIIEVTYIGRHTCSQPTNSRS* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0091 91 Gene3D WRKY domain 8 87 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g0091 91 SUPERFAMILY WRKY DNA-binding domain 22 86 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g0091 91 Pfam WRKY DNA -binding domain 24 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g0091 91 ProSiteProfiles WRKY domain profile. 23 86 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g0091 91 SMART WRKY_cls 23 85 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g0091 91 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 88 IPR044810 GO:0003700
Psa3g0091 91 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0091 Psa-Chr3 10221871 10222451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0091 1 88 WRKY Transcription Factor Family AT5G24110 60.227 4.40e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g0091 WRKY 2.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0091 - - mtr:MTR_7g117200 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0091 3 10221871 10222451 Psa5g1863 5 142533767 142536029 ECH
Psa3g0091 3 10221871 10222451 Psa3g0091 3 10221871 10222451 ECH
Psa4g3719 4 311992943 311995635 Psa3g0091 3 10221871 10222451 ECH