Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0063 ATGAATCCAAAGGGACATAGATTTGTGAGGTTGTTTGAGGATTGGAGATCAGAATCATCTTTTAGTATAGAGCAGAAAGATTCGATAAGCATAAGAAAAGACAGACCGAGAGTAAGTGATGTTTTGAAGAGTATTGGAAGAAAACTTGAAAGTGGTTTAGAGAAGATGAAGAAATTCGGAAGAAGTTCTTCGGTAGTTCACCCTTTGAGTGAAGGACAAACAAAGAAATCGGTTTCGTCTAACCGCAAAATTCTCGATCCACAAGGGCCAATGCTTCAGAAATGGAACAAAATCTTTGTAATCACATGTGTAATGGCAATCTATGTCGACCCTCTTTTCTTTTACATTCCGGTGATTGTCGGTAAAAACAAATGTGTTGATTTGGATGAAGCATTGCAGACTACTGCCAGTGTTCTTCGCACTTTCTTCGATCTTTTCTACATTCTTCGCATCATCTTTCAGTTTAGAACCGGATTTATTGCACCTTTTTCTCTTGTTTTCGGAAGAGGCGAACTCGTTGACGATCCTGTCGCCATAATGAAAAGATATTTATGTTCTCATTTCATCATTGACATTCTATCAATTATTCCACTTCCACAGATTATTTGTTTGGCTATATTTCCACACATGAAGAATTCAGCTCCATTTGTAGCAAAGGATTTGTTGAAGTATGCAGTATTAGTCCAGTATGTGCCGCGACTACTACGGATCCGTCCACTTTTCAAAGAAGTAACTAGAACTTCAGGCATATTGACAGAGACAGCATGGGCTGGAGCTGCTTACAATCTTTTTCTCTACATGCTAGCAAGTCATATGGTTGGAGCAAACTGGTATATACTTTCAGTAGAATCACAAGTGCGGTGCTGGCGCCGAGAGATGAACAAGGTTTCAAACTTTCGCGAATCATACTTGGGTTGTGGCCGGCAAAATGAATCTGTCTTCAAACTTCTCAACAGTACATGTCTTTTGGTTGACCCTGATAGTGTTAATGACACAAACACCTTCAATTATGGAATATTTTTCGATGGTCTTCAATCCGGTGTGGTAGACTCAACGACTGATTTTCCTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTCTTGGACAAAACCTCAAGACAAGTACTTATGTGGCAGAGATAGCCTTTGCAATTTTCATTGCCATCTTTGGATTGGTTTTATTCTCGTTACTTATCGGAAACATGCAGAAATATTTGCAATCTACAACAGTTAGGGTGGAAGAGATGAGAGTGAAAAGGAGGGACGCGGAATTGTGGATGTCGCACCGTATGTTACCTGATAACTTGAAGCAAAGAATTAGAAAGTATGAACAATACAAATGGCAGAAAAATAGAGGTGTTGAAGAAGAGGCTTTAATTCTTAACCTCCCTAAAGATCTCAGAAGAGACATAAAGCGTCATCTTTGCTTAGCTTTAGTTAAAAAAGTGCCACTGTTTGAGAAAATGAATGAGCAATTGTTGGATGCAATGTGCGATAGATTGAAGCCGGTTCTGTATACAGAGAAGAGTTGCATTGTTCGCGAAGAAGATCCGGTTGATGAAATGCTTTTCATCATGCGTGGAAAAGTCGCTACTATGACAACAAATGGTGGAAGAACTGGTTTCTTCAACTCCTTATTTCTAATGCCTGGTGATTTTTGCGGAGAGGAGCTTTTAACATGGGCTTTGGATCCAAACTCATCTTCAAATCTACCAACTTCAACAAGAACGGTAGAAACTATATCAGAAGTTGAAGCATTTGCGCTTATGGCTGATGATTTGAAGTTTGTTGCTTCCCAATTTAGGCGGCTTATCAACAGCAAACAACTCCAACACACTTTTAGGTCATATTCGCCGCAATGGAAGACATGGGGTGCGTGTTTCATACAGGCAGCATGGCGTCGATACTCGAAAAAGAAGATTGAGAGGACGTTGCGTGAAGCGGAAGACAAGCTACACGATGCTTTGGCAAATGAGGAAGGTTCAACTATAAGCCTTGGTGCAACCATATATGCATCAAGGTTTGCTGCAAATGCATTAAGAAACTTGAGAAGAAATAACACACACAAGAGAATGCAGCCGAGATTAATGCCTCTTTTGCCTCCAAAGCCAGCTGAGCCTGATTTCACAACTCAGAAACACTAG 2160 0.4023 MNPKGHRFVRLFEDWRSESSFSIEQKDSISIRKDRPRVSDVLKSIGRKLESGLEKMKKFGRSSSVVHPLSEGQTKKSVSSNRKILDPQGPMLQKWNKIFVITCVMAIYVDPLFFYIPVIVGKNKCVDLDEALQTTASVLRTFFDLFYILRIIFQFRTGFIAPFSLVFGRGELVDDPVAIMKRYLCSHFIIDILSIIPLPQIICLAIFPHMKNSAPFVAKDLLKYAVLVQYVPRLLRIRPLFKEVTRTSGILTETAWAGAAYNLFLYMLASHMVGANWYILSVESQVRCWRREMNKVSNFRESYLGCGRQNESVFKLLNSTCLLVDPDSVNDTNTFNYGIFFDGLQSGVVDSTTDFPQKFFYCFWWGLRNLSSLGQNLKTSTYVAEIAFAIFIAIFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRDAELWMSHRMLPDNLKQRIRKYEQYKWQKNRGVEEEALILNLPKDLRRDIKRHLCLALVKKVPLFEKMNEQLLDAMCDRLKPVLYTEKSCIVREEDPVDEMLFIMRGKVATMTTNGGRTGFFNSLFLMPGDFCGEELLTWALDPNSSSNLPTSTRTVETISEVEAFALMADDLKFVASQFRRLINSKQLQHTFRSYSPQWKTWGACFIQAAWRRYSKKKIERTLREAEDKLHDALANEEGSTISLGATIYASRFAANALRNLRRNNTHKRMQPRLMPLLPPKPAEPDFTTQKH* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0063 719 SUPERFAMILY cAMP-binding domain-like 419 607 IPR018490 -
Psa3g0063 719 MobiDBLite consensus disorder prediction 691 719 - -
Psa3g0063 719 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 717 - -
Psa3g0063 719 CDD CAP_ED 490 610 IPR000595 -
Psa3g0063 719 ProSiteProfiles cAMP/cGMP binding motif profile. 490 574 IPR000595 -
Psa3g0063 719 SUPERFAMILY Voltage-gated potassium channels 86 412 - -
Psa3g0063 719 Gene3D - 97 414 - -
Psa3g0063 719 SMART cnmp_10 490 621 IPR000595 -
Psa3g0063 719 Pfam Cyclic nucleotide-binding domain 511 600 IPR000595 -
Psa3g0063 719 Gene3D Helix hairpin bin 417 481 - -
Psa3g0063 719 Gene3D Jelly Rolls 488 608 IPR014710 -
Psa3g0063 719 Coils Coil 643 663 - -
Psa3g0063 719 Pfam Ion transport protein 95 418 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Psa3g0063 719 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 9 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0063 Psa-Chr3 8810961 8813993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0063 1 716 Ion Channels AT5G53130 62.983 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0063 K05391 - gmx:100797784 1125.92