Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0038 ATGGAGCAAAAGATGCGAGACATTGAGGCTGAGACTACTGTGCAGAAGGAAGCATCTAAGATCTTCCACAAGGGAAATACTCCAGTAACTTTGAAGTTTCATGATGTTGTATACAAAGCAAAGGCCACAAAGAAAGAACAGAAAATAATACTGAGTGGAGTGACAGGCATGGTTCAACCAGGTGAGATTCTTGCCATTTTAGGTCCATCTGGAAGCGGCAAGACAACTCTGCTAACAGCATTAGGAGGAAGACTTGGAGGGAAACTTTCTGGAACCATAACTTACAATGGAAAACTCTTTTCAAATTCAATGAAAAAGAGCATTGGATTTGTTACACAAGAGGATATTCTCTATGCTCACTTGACAGTTACAGAAACTTTAGTGTTTACTTCTCTTCTAAGATTACCTAATAGTTTCACAAAACAAGAGAAAATTGAGCATGCCAAATCCGTTCTTTCTCTACTCGGTTTAACAAAATGCAAAGATAGCATAATTGGAAAACCAATGTTGAGAGGTGTTTCTGGTGGGGAGAGAAAAAGGGTTAGTATTGGACAAGAGATGCTTATTAATCCAAGTTTGTTGTTTTTAGACGAACCTACTTCCGGGTTAGACTCAACAACAGCTCAGAAAATTGTGTCAAATTTATGGGAGCTTGCGATCGGTGGAAGAACTGTTGTGATGACAATACATCAACCTTCAAGTAGGATATATCATATGTTTCATACTGTATTGCTTTTATCAGAAGGAATTCCTTTGTATTATGGAAAGGGTTCTGAAGCTATGGAATATTTCTCTGGCGTTGGATATGAACCCGCAATCGCTATGAACCCTTCTGACTTCCTTCTAGATCTTGCAAATGGAGTTTACAGTGATCAATCGAATGAGGATCATGCCTTAAATAAGCAGAAATTGGTTTCTGCTCACAAGAACTGCTTTGATGCCAAATGGAAACCGATAATACTTGATGAAAATCCCGACAACAACGACGATGAAAGCCAGAGTAGAATTGAAGACAGTGGCTTTGGGAAATGGTCTACCACTTGGTGGCAGCAATTCACTGTTCTCCTAAAAAGAGACCTAAAAGAGAGAAAACATGAACCATTCTCTGCCTTAAGAATCTGTAAGGTCATTGTGATTGCCCTTATAACAGGACTACTTTGGTATAGGTCTAATATCTCACAACTGCAGGATCAGATTGGTCTTCTCTTTTTCATTAATAGCTTCTGGGCTGTGTTGCCATTCTACAAAGCAATTTTCACTTTCCCTCAAGAGGCAACTATGTTAGAGAAAGAAAGATCTTCTGGAATGTATAGGCTTTCATCATACTTCATATCACGGATCATAGTTGACCTTCCGGTGGAGCTTATCCTTCTAACCATATACCTTTTCATAATATATTTTATGACAGGGTTGAAACTTAATGTGCTCAATTTCTTATACACTTTGTTTACCCTCTTACTCGATGTTTTAGTTTCACAAGGACTAGGCCTTGCCATTGGTGCTATTATTATGGATACAAAATCCGCAATCACACTTGGGTCAATCATCTTGCTTAGTTTTGTGCTGGCTGTTGGATTCTATGTTCGACATGTTCCAACTTTTATAGCATGGATTAAGTACATTTCCATCAATTACTACATATACAAGCTGTTTTTAGGATCTCAGTATGACATTAATGAAACCTACCCGTGTCCTAATGGGAAGTGTTTGATTTCAGAGTTTCCGTTGATAAAGCAAATGGGAGATTTACATTTGCAAGGGCAGCTCATGGCTTTGTTGCCTCTACTCATAATGCTAATAGGTTATAGAATTGTGGCTTATATTGCTCTTATGAGGATTGGGGTCACAAAGAAGATTTCTATCTGA 1866 0.3837 MEQKMRDIEAETTVQKEASKIFHKGNTPVTLKFHDVVYKAKATKKEQKIILSGVTGMVQPGEILAILGPSGSGKTTLLTALGGRLGGKLSGTITYNGKLFSNSMKKSIGFVTQEDILYAHLTVTETLVFTSLLRLPNSFTKQEKIEHAKSVLSLLGLTKCKDSIIGKPMLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQKIVSNLWELAIGGRTVVMTIHQPSSRIYHMFHTVLLLSEGIPLYYGKGSEAMEYFSGVGYEPAIAMNPSDFLLDLANGVYSDQSNEDHALNKQKLVSAHKNCFDAKWKPIILDENPDNNDDESQSRIEDSGFGKWSTTWWQQFTVLLKRDLKERKHEPFSALRICKVIVIALITGLLWYRSNISQLQDQIGLLFFINSFWAVLPFYKAIFTFPQEATMLEKERSSGMYRLSSYFISRIIVDLPVELILLTIYLFIIYFMTGLKLNVLNFLYTLFTLLLDVLVSQGLGLAIGAIIMDTKSAITLGSIILLSFVLAVGFYVRHVPTFIAWIKYISINYYIYKLFLGSQYDINETYPCPNGKCLISEFPLIKQMGDLHLQGQLMALLPLLIMLIGYRIVAYIALMRIGVTKKISI* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0038 621 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524
Psa3g0038 621 Gene3D - 30 267 IPR027417 -
Psa3g0038 621 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 14 614 - -
Psa3g0038 621 Pfam ABC transporter 52 201 IPR003439 GO:0005524
Psa3g0038 621 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 614 - -
Psa3g0038 621 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 273 IPR003439 GO:0005524
Psa3g0038 621 Pfam ABC-2 type transporter 350 556 IPR013525 GO:0016020|GO:0140359
Psa3g0038 621 CDD ABCG_EPDR 28 255 - -
Psa3g0038 621 SMART AAA_5 60 251 IPR003593 -
Psa3g0038 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 264 IPR027417 -
Psa3g0038 621 Pfam ABC-2 type transporter 230 298 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0038 Psa-Chr3 7519853 7522452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0038 29 249 Calmodulin-binding Proteins AT2G36910 25.110 2.28e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0038 K05681 - gmx:100812397 789.645