Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0028 ATGGCCTCAACCAAAACTTTTACTTTTGAGGAAGTTTCCAAACACAACAACAAAAAAGATTGTTGGATTATGATCCATGGAAAGGTGTATGATGTGACCCCATTTTTGGATGATCATCCAGGTGGTGAAGAATCTTTAATTTCATCAACAGGGAAGGATGCTACTGTTGATTTTGAAGATGTAGGTCATAGTGACTCTGCAATAGATATGATGCACAAATACTGTATTGGAATGGTCGACACGTCGAACATTCCAACTGAAGATAAGTCCATTCCTCCTCCACCTCCGCCTACACAAGCACGCAATAATCGTGATCAATCGTCGGGATTTGTTGCAAAAGCATTGCAATTTATGTTACCGTTACTGATATTGGCCTTTGCATTTGCTATGCAACATTATGGAAAAAAGAAACAAGTCAGTGACGCATAA 429 0.3916 MASTKTFTFEEVSKHNNKKDCWIMIHGKVYDVTPFLDDHPGGEESLISSTGKDATVDFEDVGHSDSAIDMMHKYCIGMVDTSNIPTEDKSIPPPPPPTQARNNRDQSSGFVAKALQFMLPLLILAFAFAMQHYGKKKQVSDA* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0028 142 MobiDBLite consensus disorder prediction 84 105 - -
Psa3g0028 142 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Psa3g0028 142 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Psa3g0028 142 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Psa3g0028 142 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Psa3g0028 142 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Psa3g0028 142 PANTHER CYTOCHROME B5 3 137 - -
Psa3g0028 142 Gene3D - 1 85 IPR036400 -
Psa3g0028 142 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Psa3g0028 142 SMART Cyt_b5_2 7 80 IPR001199 -
Psa3g0028 142 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Psa3g0028 142 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 86 IPR036400 -
Psa3g0028 142 PANTHER CYTOCHROME B5 ISOFORM C 3 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0028 Psa-Chr3 7050941 7052155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0028 5 136 NADPH P450 reductases AT5G53560 58.333 6.95e-55 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0028 K23490 - gmx:100788796 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0028 3 7050941 7052155 Psa4g3786 4 317240369 317245051 PCT