Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0026 ATGGGTCAGTGTTACGGCAAGACTATTCCCGGCGCCGGTAACGATAACGATAACGATAACCACCATGGCCAAAACACAACCACTATAATTGCCAACACCGACTTTCATCACTCTCCGTTACCGTCTTCCGCCAACGGGGTTCCGTCTGTGAAAACTACTCCAGCTCGGTCCTCCTCGCACGCTAGTCCGTGGCCTAGTCCTTATCCTCATGGCGTGAACCCGAGTCCTTCGCCAGCTAGAGCGTCCACGCCGAGGAGATTCTTCCGGCGGCCGTTTCCACCACCTTCTCCGGCGAAGCATATAAGGGAGTCGTTGGCGAAGAGGCTGGGGAAGGGGAAGCCGAAGGAGGGACCGATACCGGAGGAGCGTGGCGTGGAAGTGGATTCGCAGTCGCTTGATAAGAGCTTTGGGTATAGTAAGAATTTTGGAGCTAAGTATGAGTTAGGGAAAGAAGTGGGACGAGGGCATTTTGGTCATACTTGTTCTGCTAGGGCAAAGAAAGGTGATCTCAAAGACCAACCCGTTGCTGTTAAGATCATTTCCAAGTCCAAGATGACCACAGCAATAGCAATTGAAGATGTTCGAAGGGAAGTGAAGTTGTTGAAGGCTCTGTCAGGCCATAAGCATCTTATCAAATTTCACGATGCTTGTGAGGATGCCAATAATGTCTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGAATTTTGTCAAGAGGAGGAAGGTATACCGAGGAGGATGCAAAAGCTATTGTTTTGCAGATTCTAAGTGTAGCTGCCTTTTGTCATCTTCAAGGTGTCGTGCATCGTGACCTGAAGCCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTGTCTGACTTCATTAGGCCAGAGGAGCGGTTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCTTACAGTGTGGAAGCAGATATATGGAGTATTGGTGTTATCACCTTCATCTTGTTATGTGGAAGTCGTCCATTCTGGGCGCGAACAGAATCTGGAATCTTTCGTACAGTTCTCAGAGCTGATCCTAACTTCGATGATTTACCTTGGCCATCTGTGTCTCCAGAAGCCAAGGACTTTGTTAAAAGGCTCCTTAACAAGGACTATCGAAAAAGAATGACGGCTGCTCAAGCTCTAACTCACCCTTGGTTGAGGGATGAAAGCCGTCCCATCCCTTTAGATATACTGATTTATAAGTTGGTGAAATCTTATCTTCATGCAACACCATTTAAACGAGCAGCAGTGAAGGCTCTTTCAAAAGCATTGACAGAGGATCAGCTAGTGTATCTTCGAGCACAGTTCAGATTGTTGGAACCAAATAGAGACGGGCATGTCTCCCTCGACAACTTTAAAATGGCTCTTGCACGCCATGCAACTGAAGCCATGAGGGAATCAAGGGTTCTTGACATCATACATACGATGGAACCGCTTGCCTATAGAAAGATGGATTTCGAAGAATTTTGTGCAGCTGCAACGAGTACATATCAGCTGGAGGCACTTGATAGGTGGGAAGATATTGCCTGCACTGCATTTGAGCATTTCGAGAGTGAGGGAAACCGTGTGATATCGATCGAAGAATTAGCAAGAGAGCTAAATCTTGGTCCTTCGGCGTATTCAGTTCTGAGAGATTGGATTCGAAATACTGACGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGAGTGACTCTGCGGAGTTCTGTACCAAGACCTCGTCAGTCTTGA 1803 0.4648 MGQCYGKTIPGAGNDNDNDNHHGQNTTTIIANTDFHHSPLPSSANGVPSVKTTPARSSSHASPWPSPYPHGVNPSPSPARASTPRRFFRRPFPPPSPAKHIRESLAKRLGKGKPKEGPIPEERGVEVDSQSLDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARAKKGDLKDQPVAVKIISKSKMTTAIAIEDVRREVKLLKALSGHKHLIKFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKAIVLQILSVAAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPEERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITFILLCGSRPFWARTESGIFRTVLRADPNFDDLPWPSVSPEAKDFVKRLLNKDYRKRMTAAQALTHPWLRDESRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTEDQLVYLRAQFRLLEPNRDGHVSLDNFKMALARHATEAMRESRVLDIIHTMEPLAYRKMDFEEFCAAATSTYQLEALDRWEDIACTAFEHFESEGNRVISIEELARELNLGPSAYSVLRDWIRNTDGKLSLLGYTKFLHGVTLRSSVPRPRQS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0026 600 ProSiteProfiles Protein kinase domain profile. 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0026 600 SUPERFAMILY Protein kinase-like (PK-like) 145 431 IPR011009 -
Psa3g0026 600 MobiDBLite consensus disorder prediction 40 128 - -
Psa3g0026 600 Pfam Protein kinase domain 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0026 600 Gene3D Phosphorylase Kinase; domain 1 139 234 - -
Psa3g0026 600 SMART serkin_6 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g0026 600 PANTHER CDPK-RELATED KINASE 3 53 592 - -
Psa3g0026 600 CDD STKc_CAMK 145 407 - -
Psa3g0026 600 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Psa3g0026 600 Gene3D Transferase(Phosphotransferase) domain 1 235 418 - -
Psa3g0026 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 53 592 - -
Psa3g0026 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Psa3g0026 600 ProSitePatterns Protein kinases ATP-binding region signature. 152 178 IPR017441 GO:0005524
Psa3g0026 600 SUPERFAMILY EF-hand 434 587 IPR011992 -
Psa3g0026 600 MobiDBLite consensus disorder prediction 40 64 - -
Psa3g0026 600 MobiDBLite consensus disorder prediction 101 128 - -
Psa3g0026 600 Gene3D - 426 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0026 Psa-Chr3 6375288 6381387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0026 63 592 EF-hand Containing Proteins AT3G50530 62.587 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa3g0026 Pkinase 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0026 - - rcu:8266291 980.704