Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0007 ATGGGCTCTGTTTGCTGTTGTTTGAGCTGCGATGATGTAGAAGATTATGTGAACCCAAATAATCCTGCGTATAGGAACGACATGTGTCTCAGTTGCTTGGTACAGAATCTTTTGAATGCGTGTGCATCAATATTCCGAAGAGGCGAAGCACTTTCAATTTCTTCATCTCTTCAAAGAACAACATCCATGACATCTTCAGCCTCACTTGATAGTTCTCTATCAGATATTTACCGTTCTCCTCCAAGGCCCTTACCATATGATGCAAAGCCTCTAAACTCAGCAGACAAATGGAATGAATGTGCCCGAGAAGATGAATTGAAGATATACCGTTCTAAGCGGATAAAGGCAACATCTGAAGATAGTAGTCAGGCTGCAGTGAAAAGAAAAATCACTAAGAATCAGAGAGAATTTGAATTTGAAGTCAGTGTTCTAGGAATAATTCAACACAAAAAATACCGTGTATCCCGTGCTTGGGATGGATCTACTGATCTGGAAACTGTTAACACGCAGCAAGTTCATTCAAGCACTTCTAAAAATGCCATGAATTTGTCTTCGGATGTTCATGGTTTGCCCGAAGCTTCGGTATCAGATACTGAGATCAAGCCAAATGATTTACCTACTCATAATGGTTTTGAACATGTCCATGTTGCAGACCTCAAACCTGCAGATTTTGAGTGCTATTTGCAGCTGGAAAATACCAAAGATTTATCACCAATAGCACAACCTGATCATACAAATGGCAATATAAGGTTTGCTCATTATTACAAGGTTGTCGAGCAAGAATGTAAAAATGTTTCCTTTATCAATAACCTGAACTTCAAAAATATAGTTGGGTTGCGTGGATTGAACTTTAAGTGCTTTAGTGATGAAGTTTATGCATGCATTGAGGAAAGTAGCTTGTCTGCATTGTCGAAAATGATACAAGCTTTTGTCGATATGTATGGTCATTCATTTCCTGAGGGTTTTATGTCATGGCAGGATATCTACAACATCGGGAACCAACTATATGACGCTGAAGTTGTTCCTAAAGCGTTTCCGCAGTTTTCTATTTCTCTATCGATCATCTGCCCAAAACAACTTCCCAAAGTTAAAGCCATTTACAATGCGGGAAAACGAAATAATAGAGCTGTTGATCCACCGGTTGATGCTAAAACCACTAATTTCCTTGTTTTAATATCAGAAGGTTTCAGGGAAGCCCGTGGTGCCTTGAGTCGTTTTGGAGCAAACTTGCCTTCAAATCAAAGTCCTTCATTAGCTTCTTTGCAAGGTGCTGGTGCTGCTGCTATAATCCTCGGATCTATGCAGAATTCACCTCACAACAGTAGTGGTGGTTTCTGA 1338 0.3984 MGSVCCCLSCDDVEDYVNPNNPAYRNDMCLSCLVQNLLNACASIFRRGEALSISSSLQRTTSMTSSASLDSSLSDIYRSPPRPLPYDAKPLNSADKWNECAREDELKIYRSKRIKATSEDSSQAAVKRKITKNQREFEFEVSVLGIIQHKKYRVSRAWDGSTDLETVNTQQVHSSTSKNAMNLSSDVHGLPEASVSDTEIKPNDLPTHNGFEHVHVADLKPADFECYLQLENTKDLSPIAQPDHTNGNIRFAHYYKVVEQECKNVSFINNLNFKNIVGLRGLNFKCFSDEVYACIEESSLSALSKMIQAFVDMYGHSFPEGFMSWQDIYNIGNQLYDAEVVPKAFPQFSISLSIICPKQLPKVKAIYNAGKRNNRAVDPPVDAKTTNFLVLISEGFREARGALSRFGANLPSNQSPSLASLQGAGAAAIILGSMQNSPHNSSGGF* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0007 445 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 90 - -
Psa3g0007 445 Pfam Mediator complex subunit 25 von Willebrand factor type A 336 394 IPR021419 -
Psa3g0007 445 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0007 Psa-Chr3 830086 833129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0007 1 90 C3H Transcription Factor Family AT5G38895 48.889 1.28e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0007 - K20473 gmx:100805223 174.481