Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4362 ATGGAAGGATTAGATGGGTTAATAGATAAGCTTTTGGAAACAAAGAATAACAGGGGAAAGCGGATTCAACTAGGGGAGTCAGAGATTCGCAACCTTTGCACCAAAGCAAAAGATGTTTTCATGAACCAGCCAAATCTACTTGAATTAGAGGCTCCAATTAACATTTGTGGAGATATACACGGCCAATATCCGGACCTATTGCGAGTATTCGAGTACGGTGGGTTTCCTCCGGATTCGAATTACCTATTTCTTGGAGACTACGTCGACAGAGGAAAACAAAGTATAGAAACAATATGTCTCCTTCTCTCATACAAGATCAAATATCCTGAGAACTTTTTCCTTCTCAGAGGAAACCATGAATGTGCATCTATTAATAGAATTTATGGATTTTATGACGAGTGCAAAAGAAGATTCAGTGTTCGCCTATGGAAGGTATTTACAGACTGCTTCAATTGTTTGCCTGTGGCTGCCGTGATTGATGATAAAATCATATGCATGCACGGTGGCCTTTCTCCTGAGATGGAGAGCTTGGATCAAATCAAAGCTATAGAAAGGCCATTAGATGTGCCTGATCAGGGTCTCTTGTGCGACCTCCTTTGGGCCGATCCAGATCCGGAAATAAAAGGTTGGGGAGAGAATGACCGTGGTGTTTCCTACACGTTCGGACCCGACAGAGTAACCGAGTTCTTGAAGAAACATGATCTCGATCTTATATGTCGGGCTCATCAGGTTGTTGAAGACGGCTACCAATTCTTTGCAGACAGGCAATTAGTTACAATATTTTCAGCACCAAATTATTGTGGTGAGTTCAATAATGCAGGTGCACTTATGTGCGTCGATCAAACTTTACTCTGTTCATTCCAAATTATCAAACCATTAAGAGGAAAGAGCACATGTTAG 900 0.4156 MEGLDGLIDKLLETKNNRGKRIQLGESEIRNLCTKAKDVFMNQPNLLELEAPINICGDIHGQYPDLLRVFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLSYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKVFTDCFNCLPVAAVIDDKIICMHGGLSPEMESLDQIKAIERPLDVPDQGLLCDLLWADPDPEIKGWGENDRGVSYTFGPDRVTEFLKKHDLDLICRAHQVVEDGYQFFADRQLVTIFSAPNYCGEFNNAGALMCVDQTLLCSFQIIKPLRGKSTC* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4362 299 CDD MPP_PP1_PPKL 4 292 - -
Psa2g4362 299 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Psa2g4362 299 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Psa2g4362 299 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Psa2g4362 299 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Psa2g4362 299 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Psa2g4362 299 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Psa2g4362 299 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Psa2g4362 299 Pfam Calcineurin-like phosphoesterase 53 244 IPR004843 GO:0016787
Psa2g4362 299 Gene3D - 2 298 IPR029052 -
Psa2g4362 299 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
Psa2g4362 299 SUPERFAMILY Metallo-dependent phosphatases 19 294 IPR029052 -
Psa2g4362 299 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Psa2g4362 299 SMART pp2a_7 24 294 IPR006186 GO:0016787
Psa2g4362 299 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 298 - -
Psa2g4362 299 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4362 Psa-Chr2 427407793 427411369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4362 53 240 Calmodulin-binding Proteins AT5G63870 33.482 2.90e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4362 K06269 - gmx:100804212 575.089