Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4355 ATGTTTGAGGCTAAGGTTAAGGCGTTAAATTTGGACCAAGCAAAAGAAAGAGGTGTTGAAAGAAGAAAACGTGGCAAAAGCGTTGCCTATGCTGATGTTACTATGTTAGTTGTAGTTGGAAGGCACTTGGAATCAATATCATATCATTTCATGGCTTCTTTGCTCCATCCAACTCCAACTGCAATCTGTTTCTTCTATCCCTTAAAACCCACCCTTCCATCACACAATTTTTCTTTATTAACTAACACTAATCGTTTCAACACAAAGTGTAATGCATTTTTTGACAATGTCGCCAATGTTGTTGACGTGGACCACTTTCCTTCTATCATCCAATCAGGAATACTGCAGTTTCAAGAGTTACCAGATATGCAAAGATGGGAGTTTCTTGTGTTTGGTGGTCTCATATGGATTTACTTAACTTCAAGACCTGGTGTTCTTATTGGTGCCATTGATGCTTACCTTCTTGCTCCTCTTCAACTTGGTTTGGACAATCTATCTGGAAAGAGAAACTTGAAGACACGTGATTTTCTTGTTGGAGATAAAATTGGTGAAGGGTCTTTTGGTGTTGTTTATTCTGGTGTTTTGGTGCCAAAGAATGTGCTCGATGGAGAGGTCAATAACAAGGGAAGATCCAAGGCTGCACTGTTGGATCCCAAAGCCAAAGATAAAGTCATTCTTAAAAAGGTTAAGGTTGAAATACGAGGGGCTGAAGAATTCGGTGAATTTGAGGAATGGTTTAATTACAGGCTATCTAGAGCAGCACCAGAAACATGTGCTGAGTTCCTTGGAAGTTTTGTAGCTGATAAAACAAACTCTAAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAATTTGAGGGAGATCTTACGCTTGCCGATTACATGAAGGGGCGTAGCTTCCCTTCAAACTTAGAACCTGTCATGTTTGGACGTGTCTTGCAAGGTGTAGACTCTTTTCGACGAAATGCATTGATCATCAAGCAAATCATGCGCCAGATAATTACTTCTCTTAAGAAAATTCACGATACGGGCATTGTTCATAGAGATATAAAGCCAGCCAACTTAGTCGTCACTAAACGGGGGCGGATTAAACTTATTGATTTTGGTGCAGCCACAGACCTTCGGATCGGAAAGAATTATGTTCCCGACCGCACCCTTTTGGATCCTGATTATTGTCCGCCAGAACTATATGTACTCCCAGAAGAAACACCAAGTCCTCCACCAGCGCCAATTGCCGCTTTCTTTTCACCAATCCTGTGGCAGTTAAACAGCCCTGATCTGTTTGATATGTATTCTGCTGGGATTGTACTCCTGCAAATGGCAATACCAACTTTAAGGTCTCCCGCTGGTTTGAAGAATTTCAACTTGGAAATAAAAAACTGTGGTTATGATTTGAAAAAATGGAGGGAGTATACTCGCCTGAGGCCCGACTTCGAAATTCTTGATAGTGAATCTGGTAGAGGTTGGGACTTAGCAACAAAGCTTATCTCTGAGAGAGGTCTCTTAAGAAGAGGACGTTTATCTGCTGCTTCAGCTTTGAGACATCCTTATTTTCTTCTAGGAGGTGATCAGGCAGCCGCAGTTCTTTCAAAATTAAGCCTAAGTAGAAAGTGA 1614 0.4108 MFEAKVKALNLDQAKERGVERRKRGKSVAYADVTMLVVVGRHLESISYHFMASLLHPTPTAICFFYPLKPTLPSHNFSLLTNTNRFNTKCNAFFDNVANVVDVDHFPSIIQSGILQFQELPDMQRWEFLVFGGLIWIYLTSRPGVLIGAIDAYLLAPLQLGLDNLSGKRNLKTRDFLVGDKIGEGSFGVVYSGVLVPKNVLDGEVNNKGRSKAALLDPKAKDKVILKKVKVEIRGAEEFGEFEEWFNYRLSRAAPETCAEFLGSFVADKTNSKFTKGGKWLVWKFEGDLTLADYMKGRSFPSNLEPVMFGRVLQGVDSFRRNALIIKQIMRQIITSLKKIHDTGIVHRDIKPANLVVTKRGRIKLIDFGAATDLRIGKNYVPDRTLLDPDYCPPELYVLPEETPSPPPAPIAAFFSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPAGLKNFNLEIKNCGYDLKKWREYTRLRPDFEILDSESGRGWDLATKLISERGLLRRGRLSAASALRHPYFLLGGDQAAAVLSKLSLSRK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4355 537 Pfam Protein kinase domain 325 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4355 537 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 38 535 - -
Psa2g4355 537 Gene3D Phosphorylase Kinase; domain 1 162 285 - -
Psa2g4355 537 Gene3D Transferase(Phosphotransferase) domain 1 318 520 - -
Psa2g4355 537 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 38 535 IPR044803 GO:0004674|GO:0009579
Psa2g4355 537 SUPERFAMILY Protein kinase-like (PK-like) 171 519 IPR011009 -
Psa2g4355 537 ProSiteProfiles Protein kinase domain profile. 176 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4355 537 SMART serkin_6 176 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4355 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4355 Psa-Chr2 427311780 427314817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4355 176 374 MAP Kinase Kinase Kinase AT3G13530 27.723 1.88e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Psa2g4355 Pkinase 2.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4355 - - mtr:MTR_8g005720 733.791