Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4346 ATGGATTTTGAAGGTAGTAGTACACCAAAGAAGGAGATGGAAGGAGAAGGAGGTGTGGAGGGTTCGAAGATGAAGGGTACTGGAAATCAAAGTAGTAAAGATATGATTTTCAGAGCTGATAGGATTGATCTCAAGAATTTGGATGCTCAATTGGAAAAGCACTTAAGCAGGGTTTGGTCGAGAAATACTAATGAGCCGAAAAGGCCTAAAGAAGAATGGGAGATTGAATTGGCGAAATTGAATTTGCGATATATTGTTGCTCATGGTGCTTATGGTACTGTCTATAGAGGCACGTATGATACTCAAGATGTTGCAGTGAAAGTGTTGGATTGGGGTGATGATGGTGTTGCCACCGCTGCTGAAACTGCCGCTTTACGCGCATCTTTTAGGCAGGAGGTTGCCGTCTGGCACAAACTTGACCATCGAAATGTCACAAAGTTTGTCGGAGCTTCAATGGGAACTTCGAATCTTAAGATTCCTACCAAAAACTCTTCGACCGACAATCAAGAGACCCTTCCTTCTAGGGCATGTTGTGTTATCGTCGAGTTTCTCACTGGTGGAACGCTGAAACAATACTTGATCAAAAATAGGCGGAAGAAACTTGCGTATAAGATTGTGGTTCAGCTTGCTTTGGACCTCTCTAGAGGTCTTAGCTATCTGCATTCGAAGAGGATTGTTCATCGTGATGTTAAGACGGAGAATATGTTGCTAGATGGTAGCCGGAATCTAAAGATAGCTGATTTTGGAGTTGCTCGCGTTGAAGCTATGAATCCAAGTGACATGACCGGTGAAACTGGAACCCTCGGATATATGGCTCCCGAGGTTTTGGATGGTAAACCTTACAACAGGACATGTGATGTCTATAGCTTTGGCATTTGCCTGTGGGAAATTTACTGCTGTGACATGCCCTATCCAGATCTTAGCTTTGCTGACGTGTCTTCTGCTGTCGTCCGTCAGAATTTACGACCGGACATTCCGAGGTGTTGTCCAAGTGCATTGGCGAGCATCATGCGTAAGTGCTGGGATGGGAATCCGAGCAAACGTCCGGAAATGCACGAGGTGGTGAGAATGCTGGAAGCACTGGACACAAGCAAAGGTGGCGGAATGATACCGGACGACCAGAGTCCAGGTTGCTTTTGTTTCGCACCGGCTCGTGGTCCTTAA 1164 0.457 MDFEGSSTPKKEMEGEGGVEGSKMKGTGNQSSKDMIFRADRIDLKNLDAQLEKHLSRVWSRNTNEPKRPKEEWEIELAKLNLRYIVAHGAYGTVYRGTYDTQDVAVKVLDWGDDGVATAAETAALRASFRQEVAVWHKLDHRNVTKFVGASMGTSNLKIPTKNSSTDNQETLPSRACCVIVEFLTGGTLKQYLIKNRRKKLAYKIVVQLALDLSRGLSYLHSKRIVHRDVKTENMLLDGSRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRTCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPRCCPSALASIMRKCWDGNPSKRPEMHEVVRMLEALDTSKGGGMIPDDQSPGCFCFAPARGP* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4346 387 Gene3D Transferase(Phosphotransferase) domain 1 186 368 - -
Psa2g4346 387 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Psa2g4346 387 CDD STKc_MAP3K-like 86 358 - -
Psa2g4346 387 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 381 - -
Psa2g4346 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Psa2g4346 387 MobiDBLite consensus disorder prediction 1 31 - -
Psa2g4346 387 SUPERFAMILY Protein kinase-like (PK-like) 57 358 IPR011009 -
Psa2g4346 387 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Psa2g4346 387 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4346 387 PRINTS Tyrosine kinase catalytic domain signature 181 194 IPR001245 GO:0004672|GO:0006468
Psa2g4346 387 PRINTS Tyrosine kinase catalytic domain signature 219 237 IPR001245 GO:0004672|GO:0006468
Psa2g4346 387 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Psa2g4346 387 PRINTS Tyrosine kinase catalytic domain signature 329 351 IPR001245 GO:0004672|GO:0006468
Psa2g4346 387 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 10 381 - -
Psa2g4346 387 SMART serkin_6 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa2g4346 387 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4346 Psa-Chr2 426715011 426719905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4346 28 387 MAP Kinase Kinase Kinase AT3G22750 80.833 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa2g4346 PK_Tyr_Ser-Thr 1.2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4346 - - mtr:MTR_5g006560 694.115