Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4306 ATGTTGTCAGTAGCTCCTTCTCTTGATGCCAAACAAACCCCAGAACTTGATCAGATAAATCAGCAAAAACCAGGTGATTATGTTGATAATCCCATTTCCAAGCAAACTAATCACATTTTTAAATCTAAATTACCTGATATACCAATCTCTAACAACCTTCCACTTCACACCTACTGCTTCGAGAAACTTCCTCAAACCGCCGATCGTCCTTGTCTCATCGTCGCTTCCACCGGAAAAATCTACACCTACGCAGAAACTTATCTCCTTTCGAGAAAAATCGCATCAGGTTTATCCAAACTCGGTATTCAAAAAGGAGACGTCATCATGATTCTCCTCCAAAACTCAGCTGAATTTGTTCTCTCTTTCATCGCTGCCTCAATGATCGGCGCCGTAGCAACCACCGCCAATCCATTCTATACCACAGCTGAGATCTTCAAACAAATAACAGCTTCCAAGACGAAGCTGATCATCACACAAGCAATGTATGTTGACAAACTCCGTCCGAACGAAGAGAACGGTGATTTTGACTTTAAGGTGATCACTATCGACGAACCGCCGGTGAATTGTTTACATTTCTCGGTGATTTCTGAAGCGAAGGAAGAGGAATTGCCGGAAGTTGAGTTCGATCCGGAAGACGCGCTGGCACTTCCTTTTTCTTCCGGTACGACGGGATTACCTAAAGGTGTAATTCTAACGCATAAGAGTTTAATAACGAGTGTGGCTCAACAAGTCGACGGCGAGAATCCGAACCTGTATTTAGCAACAGAAGATGTTCTTCTTTGCGTTCTTCCATTGTTTCATATATTTTCTCTCAACAGTGTGCTATTGTGTGCACTGAGAGCAGGGAGTGCGGTTCTGTTAATGCATAAATTCGAGATCGGGACGTTGCTTGGTCTTATACAAGAACATAAAGTGACGGTGGCGATGGTGGTTCCGCCGCTAGTTTTAGCGTTAGCGAAGAATCCGAAGGTTGCGGAATTTGACCTTAGCTCGATACGGTTGGTGCTGTCCGGAGCTGCCCCGTTAGGGAAGGAGCTCGAAGAGACTCTCCATAACAGAATTCCTCGAGCTGTTTTGGGACAGGGGTACGGTATGACAGAGGCAGGTCCTGTACTCTCCATGTCTTTGGGCTTTGCAAAGCATCCATTTCCAACAAGATCAGGCTCATGTGGCACTGTTGTAAGAAATGCAGAACTCAAAGTTCTTGACGCTGAAACTGGTCTTTCTCTTGGTTATAATCAAACTGGTGAAATTTGCATCCGAGGCCAACAAATCATGAAAGGATATTTGAATGATGAGAATGCAACAAAGACTACTATTGATGAGGAGGGCTGGCTTCATACTGGTGATGTTGGCTATATAGATGACAATGATGAGATTTTCATAGTTGACAGGGTGAAGGAACTCATCAAATTCAAAGGCTTCCAAGTGCCCCCTGCTGAACTTGAAGGCCTTCTTGTAACTCATCCATCAATTGCAGACGCAGCTGTTGTTCCTCAAAAAGATGTTGCTGCTGGTGAAGTTCCTGTAGCCTTTGTGGTAAGATCAAATGGAAATGATTTAACTGAAGAGGCTATAAAGGAGTTTATATCTAAACAGGTGGTGTTTTATAAAAGACTACACAAAGTTTATTTCATTCATGCAATTCCCAAGTCTCCAGCAGGAAAGATATTGAGGAAAGACCTTAGAGCAAAGCTTGAAAACTCCACTCAAATGCCTTAA 1722 0.4326 MLSVAPSLDAKQTPELDQINQQKPGDYVDNPISKQTNHIFKSKLPDIPISNNLPLHTYCFEKLPQTADRPCLIVASTGKIYTYAETYLLSRKIASGLSKLGIQKGDVIMILLQNSAEFVLSFIAASMIGAVATTANPFYTTAEIFKQITASKTKLIITQAMYVDKLRPNEENGDFDFKVITIDEPPVNCLHFSVISEAKEEELPEVEFDPEDALALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLATEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGTLLGLIQEHKVTVAMVVPPLVLALAKNPKVAEFDLSSIRLVLSGAAPLGKELEETLHNRIPRAVLGQGYGMTEAGPVLSMSLGFAKHPFPTRSGSCGTVVRNAELKVLDAETGLSLGYNQTGEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVTHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEAIKEFISKQVVFYKRLHKVYFIHAIPKSPAGKILRKDLRAKLENSTQMP* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4306 573 CDD 4CL 49 562 - -
Psa2g4306 573 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
Psa2g4306 573 Pfam AMP-binding enzyme 64 472 IPR000873 -
Psa2g4306 573 Gene3D - 467 571 IPR045851 -
Psa2g4306 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 38 565 - -
Psa2g4306 573 PANTHER 4-COUMARATE--COA LIGASE 3 38 565 - -
Psa2g4306 573 MobiDBLite consensus disorder prediction 13 28 - -
Psa2g4306 573 Gene3D - 31 466 IPR042099 -
Psa2g4306 573 SUPERFAMILY Acetyl-CoA synthetase-like 17 568 - -
Psa2g4306 573 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Psa2g4306 573 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4306 Psa-Chr2 425631834 425636786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4306 31 479 Monolignol Biosynthesis Gene Families AT1G65060 71.681 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4306 K01904 - gmx:547492 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4306 2 425631834 425636786 Psa2g4306 2 425631834 425636786 ECH