Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4261 ATGGATAATAAAAAATTTGAATTTCCGGCAGGTTTTCGATTTCATCCAACTGACGTAGAACTCATAAATCAATATCTTGTCAAGAAGGTCAATGACAATAGCTTCTCTTTTATAGCTATTTCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGAGTTGGCAAAAATGGGAGAAACAGAATGGTATTATTTCTGTGTGAGGGATAAAAAATATCCAAATGGTCAAAGAACAAATAGAGCCACTAATGCTGGTTATTGGAAGGCTACGGGAAGAGATAAGAAGATTTATGACAAAAATTTATTGATTGGGATGAAGAAGACATTGGTTTTCTATATAGGAAGAGCTCCGATTGGTGTAAAAACTAGATGGGTTATGCATGAATACAGATTGGAGGGTACCACACTCTCTAATGACATTTTAGCGAAGAGAGAAACGGGTGAATGGGCTATCAGCAGAATCTATGAGAAGGGTAATTATGAAAAGAAAATGTGTGGTTCAAGACTTGGAATGTTTAACTCCTCTAGAGAAGAACCACTAAACACTAATGAATCTCCATTGATGAATTCTTCTCCATACACTAATGGGGAGTTCTCTTATGCAATTAATTCATTCACCATTCCAAATCAAATGCAAGACAACAACATTGTTGGTAACAATGAAGCTAGTATCATGAACGTTTCATCCTCTTCAAAACAAATTGATGATTACCCTTTTGCTGAAGCAACACAAAACTATTTCTTATCTCAAGAAAAATCTATGATGAGGATGCAATCGGAGAATGAAAATTATGGATCAAGTTCAAAGCAAACTCTTCAACATGATTTTTCTTTTGGTGGAGATCTTGATGCTGATATCTCATCAGTTGTATATGGAAATGACATGTTTCCAAGGTGGTATGAGAATCAAGAATTGATACCTGATTCTCATGGACCCGTGGTCACTAATCGCTCGTGGAATTACTAA 972 0.357 MDNKKFEFPAGFRFHPTDVELINQYLVKKVNDNSFSFIAISEVDMNKCEPWDLPELAKMGETEWYYFCVRDKKYPNGQRTNRATNAGYWKATGRDKKIYDKNLLIGMKKTLVFYIGRAPIGVKTRWVMHEYRLEGTTLSNDILAKRETGEWAISRIYEKGNYEKKMCGSRLGMFNSSREEPLNTNESPLMNSSPYTNGEFSYAINSFTIPNQMQDNNIVGNNEASIMNVSSSSKQIDDYPFAEATQNYFLSQEKSMMRMQSENENYGSSSKQTLQHDFSFGGDLDADISSVVYGNDMFPRWYENQELIPDSHGPVVTNRSWNY* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4261 323 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 1 319 - -
Psa2g4261 323 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Psa2g4261 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 319 - -
Psa2g4261 323 Pfam No apical meristem (NAM) protein 9 133 IPR003441 GO:0003677|GO:0006355
Psa2g4261 323 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Psa2g4261 323 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4261 Psa-Chr2 424673522 424675752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4261 6 323 NAC Transcription Factor Family AT5G07680 43.675 1.71e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa2g4261 NAM 6.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4261 - - cam:101488836 412.92