Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4257 ATGGGATTCTGGGGGATTGAAGTGAAACCTGGGAAACCGGTTCCTTATCATGCTGACAATGTGCAAGGAAAGCTTCATGTCACTCAGGCTACTATTGGCAATGGTTCATCAACAGAGAAAAGCATTCTTCAGTGCTCTTCTGGACATAAAAGTGCAGTTTTTTTGTGTACATTGCTGCCAAATAAAGTTGAGTCGTGCCCTCTGAATCTTAAGTTTGATGACGAGGACTTGGTGGCATTCTCAGTCATCGGTTCACGGAGCATCCATCTTTCTGGTTATTTTGTGGCAGATGATGGGGACGACCTGAGGGATGACTATGAGTATGATTCAATGGGAGAGGACGTGGCAACTGATTCAGAGGAGTCATCTGAATATGATAGTGAAAATGGATATGATGAACACTTTTTTGATGATAGCGATATGGACACGTATACAGCTTCGCCAGTCCCAAATAGTGGAGTTGTGATTGAGGAAATACACGACGACAATGAGCCTGAAAAGGAAGCTGACCCAGCAAAGCAATCGAAGAAAAAAGAACAGCCAGCTCTCTTGAAAGAGAAACCCATCAAAAAAGAAAGTCAGCCAGATATCAATAGAGGTGACAATAACCTACTTGTTCTGGAAAGTGAAGATGAAGATGGTTTCCCAATTTCCACTTCAAAGCAAGCTAAATCTGAGTCTCAGAAAACAGAACCAGGTGCAAAAGAACAAACGCTCAAAAAAACTGGGAAGTCCAATAATAAGGTAAAAGATGTTGAACTTTCTGCTGGCTTAAAGCGAAAGGGTGAAAGTGCCGATGAGGACGAGCAGCTTCAAGATGGGAAAAAGAAGAAGAAGAAGAAGTCGAAAGATCATGGTAAGGAGGAAGTTGCTCATGTACCTGAGACTAATGTTACTGTGCTAGATGAAAAGCATTCTGAAGGTGAGGAGATTAAAACTACAAGTGATCAGAATGATGTTTCCCATGCAAAGGATGGACATGATGGAAAACTATCCAATGATGAAGTCCTTGTTGAGAAGAAAAACAAGAAGAAAAAGAAGAAAAAGAACAAAGAGACTGAAGGAGTAGCTACTGGGAATGAAATTGCTACAACTGTTGAAAATCAGAAGTTGTCTACCTCTGAGGAAAAAGGGAAAGGTCAAACTGAAGCCAAGCCATCTAATGTGAGAACATATGCAAATGGGTTGGTTATAGAGGACATATCTATGGGTAAACCAGATGGCAAAAGAGCTGAACTTGGAAAGAAGGTCAGTGTTAAATATATTGGCAAGCTGAAAAAAGATGGGAAAATATTTGACTCATGTGTCGGAAAAGCACCTTTTAAATTTCGCCTTGGTGTAGGACAAGTCATCAAGGGGTGGGATGTTGGAATAATTGGGATGAGGGTTGGTGACAAAAGAAGAATTACAATTCCACCATCTATGGGATACGGAGACAAACGTGTTGGGGCTATACCACAAAATTCATGGCTTGTATTTGATGTTGAGTTGATTGGTGTTGGTAACTAA 1509 0.4089 MGFWGIEVKPGKPVPYHADNVQGKLHVTQATIGNGSSTEKSILQCSSGHKSAVFLCTLLPNKVESCPLNLKFDDEDLVAFSVIGSRSIHLSGYFVADDGDDLRDDYEYDSMGEDVATDSEESSEYDSENGYDEHFFDDSDMDTYTASPVPNSGVVIEEIHDDNEPEKEADPAKQSKKKEQPALLKEKPIKKESQPDINRGDNNLLVLESEDEDGFPISTSKQAKSESQKTEPGAKEQTLKKTGKSNNKVKDVELSAGLKRKGESADEDEQLQDGKKKKKKKSKDHGKEEVAHVPETNVTVLDEKHSEGEEIKTTSDQNDVSHAKDGHDGKLSNDEVLVEKKNKKKKKKKNKETEGVATGNEIATTVENQKLSTSEEKGKGQTEAKPSNVRTYANGLVIEDISMGKPDGKRAELGKKVSVKYIGKLKKDGKIFDSCVGKAPFKFRLGVGQVIKGWDVGIIGMRVGDKRRITIPPSMGYGDKRVGAIPQNSWLVFDVELIGVGN* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4257 502 MobiDBLite consensus disorder prediction 284 341 - -
Psa2g4257 502 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 414 501 IPR001179 GO:0003755
Psa2g4257 502 MobiDBLite consensus disorder prediction 159 197 - -
Psa2g4257 502 MobiDBLite consensus disorder prediction 228 275 - -
Psa2g4257 502 PIRSF FK506-bp_FPR3 246 501 IPR023566 GO:0003755
Psa2g4257 502 PIRSF FK506-bp_FPR3 1 54 IPR023566 GO:0003755
Psa2g4257 502 PIRSF FK506-bp_FPR3 49 262 IPR023566 GO:0003755
Psa2g4257 502 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 409 498 IPR001179 GO:0003755
Psa2g4257 502 PANTHER PEPTIDYLPROLYL ISOMERASE 271 500 - -
Psa2g4257 502 PANTHER PEPTIDYLPROLYL ISOMERASE 1 249 - -
Psa2g4257 502 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 271 500 - -
Psa2g4257 502 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 249 - -
Psa2g4257 502 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Psa2g4257 502 Gene3D - 359 502 IPR046357 GO:0003755
Psa2g4257 502 Gene3D Nucleoplasmin core domain 1 100 - -
Psa2g4257 502 SUPERFAMILY FKBP-like 375 500 - -
Psa2g4257 502 MobiDBLite consensus disorder prediction 357 371 - -
Psa2g4257 502 MobiDBLite consensus disorder prediction 159 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4257 Psa-Chr2 424527988 424532590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4257 412 498 Calmodulin-binding Proteins AT3G25230 50.562 1.92e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4257 K14826 - gmx:100792856 632.098